Cargando…

The RNA-binding protein RBP33 dampens non-productive transcription in trypanosomes

In-depth analysis of the transcriptomes of several model organisms has revealed that genomes are pervasively transcribed, giving rise to an abundance of non-canonical and mainly antisense RNA polymerase II-derived transcripts that are produced from almost any genomic context. Pervasive RNAs are degr...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gómez-Liñán, Claudia, Gómez-Díaz, Elena, Ceballos-Pérez, Gloria, Fernández-Moya, Sandra M, Estévez, Antonio M
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Gene regulation, Chromatin and Epigenetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757043/ https://www.ncbi.nlm.nih.gov/pubmed/36454008 http://dx.doi.org/10.1093/nar/gkac1123

Ejemplares similares

An RNA-binding protein complex regulates the purine-dependent expression of a nucleobase transporter in trypanosomes
por: Rico-Jiménez, Miriam, et al.
Publicado: (2021)

The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
por: Tabib-Salazar, Aline, et al.
Publicado: (2013)

TDP1 is an HMG chromatin protein facilitating RNA polymerase I transcription in African trypanosomes
por: Narayanan, Mani Shankar, et al.
Publicado: (2013)

CarD and RbpA modify the kinetics of initial transcription and slow promoter escape of the Mycobacterium tuberculosis RNA polymerase
por: Jensen, Drake, et al.
Publicado: (2019)

RbpA relaxes promoter selectivity of M. tuberculosis RNA polymerase
por: Sudalaiyadum Perumal, Ayyappasamy, et al.
Publicado: (2018)

Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the σ(A)-containing RNA polymerase holoenzyme
por: Hu, Yangbo, et al.
Publicado: (2012)

Histone divergence in trypanosomes results in unique alterations to nucleosome structure
por: Deák, Gauri, et al.
Publicado: (2023)

Mycobacterium RbpA cooperates with the stress-response σ(B) subunit of RNA polymerase in promoter DNA unwinding
por: Hu, Yangbo, et al.
Publicado: (2014)

Co-dependence between trypanosome nuclear lamina components in nuclear stability and control of gene expression
por: Maishman, Luke, et al.
Publicado: (2016)

TelAP1 links telomere complexes with developmental expression site silencing in African trypanosomes
por: Reis, Helena, et al.
Publicado: (2018)

Histone variant H3.3 stimulates HSP70 transcription through cooperation with HP1γ
por: Kim, Hyunjung, et al.
Publicado: (2011)

Dissecting the roles of the histone chaperones reveals the evolutionary conserved mechanism of transcription-coupled deposition of H3.3
por: Song, Yunkyoung, et al.
Publicado: (2013)

Dynamic site-specific recruitment of RBP2 by pocket protein p130 modulates H3K4 methylation on E2F-responsive promoters
por: Zargar, Zaffer Ullah, et al.
Publicado: (2018)

Altering transcription factor binding reveals comprehensive transcriptional kinetics of a basic gene
por: Popp, Achim P, et al.
Publicado: (2021)

Resveratrol and EGCG bind directly and distinctively to miR-33a and miR-122 and modulate divergently their levels in hepatic cells
por: Baselga-Escudero, Laura, et al.
Publicado: (2014)

Genome-wide mapping reveals conserved and diverged R-loop activities in the unusual genetic landscape of the African trypanosome genome
por: Briggs, Emma, et al.
Publicado: (2018)

HIRA-mediated loading of histone variant H3.3 controls androgen-induced transcription by regulation of AR/BRD4 complex assembly at enhancers
por: Morozov, Viacheslav M, et al.
Publicado: (2023)

NMD3 regulates both mRNA and rRNA nuclear export in African trypanosomes via an XPOI-linked pathway
por: Bühlmann, Melanie, et al.
Publicado: (2015)

H3.Y discriminates between HIRA and DAXX chaperone complexes and reveals unexpected insights into human DAXX-H3.3-H4 binding and deposition requirements
por: Zink, Lisa-Maria, et al.
Publicado: (2017)

Dual role of histone variant H3.3B in spermatogenesis: positive regulation of piRNA transcription and implication in X-chromosome inactivation
por: Fontaine, Emeline, et al.
Publicado: (2022)

Mechanisms of in vivo binding site selection of the hematopoietic master transcription factor PU.1
por: Pham, Thu-Hang, et al.
Publicado: (2013)

Redundancy of primary RNA-binding functions of the bacterial transcription terminator Rho
por: Shashni, Rajesh, et al.
Publicado: (2014)

Protein–DNA binding dynamics predict transcriptional response to nutrients in archaea
por: Todor, Horia, et al.
Publicado: (2013)

Positional distribution of human transcription factor binding sites
por: Koudritsky, Mark, et al.
Publicado: (2008)

Identification of mammalian transcription factors that bind to inaccessible chromatin
por: Pop, Romana T, et al.
Publicado: (2023)

A balancing act in transcription regulation by response regulators: titration of transcription factor activity by decoy DNA binding sites
por: Gao, Rong, et al.
Publicado: (2021)

Evaluating the impact of single nucleotide variants on transcription factor binding
por: Shi, Wenqiang, et al.
Publicado: (2016)

Promoter-proximal transcription factor binding is transcriptionally active when coupled with nucleosome repositioning in immediate vicinity
por: Yadav, Vinod Kumar, et al.
Publicado: (2014)

Long non-coding RNA ChRO1 facilitates ATRX/DAXX-dependent H3.3 deposition for transcription-associated heterochromatin reorganization
por: Park, Jinyoung, et al.
Publicado: (2018)

Quantification of transcription factor-DNA binding affinity in a living cell
por: Belikov, Sergey, et al.
Publicado: (2016)

Structural basis of specific DNA binding by the transcription factor ZBTB24
por: Ren, Ren, et al.
Publicado: (2019)

Yeast transcription factor Msn2 binds to G4 DNA
por: Duy, Duong Long, et al.
Publicado: (2023)

DAXX co-folds with H3.3/H4 using high local stability conferred by the H3.3 variant recognition residues
por: DeNizio, Jamie E., et al.
Publicado: (2014)

Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters
por: Fuxman Bass, Juan I., et al.
Publicado: (2014)

Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome
por: Choukrallah, Mohamed-Amin, et al.
Publicado: (2012)

Pre-marked chromatin and transcription factor co-binding shape the pioneering activity of Foxa2
por: Cernilogar, Filippo M, et al.
Publicado: (2019)

Genome-wide binding studies reveal DNA binding specificity mechanisms and functional interplay amongst Forkhead transcription factors
por: Chen, Xi, et al.
Publicado: (2016)

Binding of the transcription factor Atf1 to promoters serves as a barrier to phase nucleosome arrays and avoid cryptic transcription
por: García, Patricia, et al.
Publicado: (2014)

Reciprocal stabilization of transcription factor binding integrates two signaling pathways to regulate fission yeast fbp1 transcription
por: Koda, Wakana, et al.
Publicado: (2021)

The Hox transcription factor Ultrabithorax binds RNA and regulates co-transcriptional splicing through an interplay with RNA polymerase II
por: Carnesecchi, Julie, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_c9difl81nf6skbkv5qd2bkbg4p