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A new limit for blood metabolite analysis using (1)H NMR spectroscopy

Human blood is the most widely used biospecimen in the clinic and the metabolomics field. While both mass spectrometry and NMR spectroscopy are the two premier analytical platforms in the metabolomics field, NMR exhibits several unsurpassed characteristics for blood metabolite analysis, the most imp...

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Autores principales: Nagana Gowda, G.A., Pascua, Vadim, Raftery, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757760/
https://www.ncbi.nlm.nih.gov/pubmed/36530463
http://dx.doi.org/10.1016/j.jmro.2022.100082
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author Nagana Gowda, G.A.
Pascua, Vadim
Raftery, Daniel
author_facet Nagana Gowda, G.A.
Pascua, Vadim
Raftery, Daniel
author_sort Nagana Gowda, G.A.
collection PubMed
description Human blood is the most widely used biospecimen in the clinic and the metabolomics field. While both mass spectrometry and NMR spectroscopy are the two premier analytical platforms in the metabolomics field, NMR exhibits several unsurpassed characteristics for blood metabolite analysis, the most important of which are its ability to identify unknown metabolites and its quantitative nature. However, the relatively small number of metabolites accessible by NMR has restricted the scope of its applications. Enhancing the limit of identified metabolites in blood will therefore greatly impact NMR-based metabolomics. Continuing our efforts to address this major issue, our current study describes the identification of 12 metabolites, which expands the number of quantifiable blood metabolites by ~15%. These results, in combination with our earlier efforts, now provide access to nearly 90 metabolites, which is the highest to date for a simple 1D (1)H NMR experiment that is widely used in the metabolomics field. Metabolites were identified based on the comprehensive investigation of human blood and plasma using 1D/2D NMR techniques. The newly identified metabolites were validated based on chemical shift databases, spectra of authentic compounds obtained under conditions identical to blood/plasma, and, finally, spiking experiments using authentic compounds. Considering the high reproducibility of NMR and the sensitivity of chemical shifts to altered sample conditions, experimental protocols and peak annotations are provided for the newly identified metabolites, which serve as a template for identification of blood metabolites for routine applications. Separately, the identified metabolites were evaluated for their sensitivity to preanalytical conditions. The results reveal that among the newly identified metabolites, inosine monophosphate (IMP) and nicotinamide are associated with labile coenzymes and their levels are sensitive to preanalytical conditions. The study demonstrates the expansion of quantifiable blood metabolites using NMR to a new height and is expected to greatly impact blood metabolomics.
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spelling pubmed-97577602022-12-16 A new limit for blood metabolite analysis using (1)H NMR spectroscopy Nagana Gowda, G.A. Pascua, Vadim Raftery, Daniel J Magn Reson Open Article Human blood is the most widely used biospecimen in the clinic and the metabolomics field. While both mass spectrometry and NMR spectroscopy are the two premier analytical platforms in the metabolomics field, NMR exhibits several unsurpassed characteristics for blood metabolite analysis, the most important of which are its ability to identify unknown metabolites and its quantitative nature. However, the relatively small number of metabolites accessible by NMR has restricted the scope of its applications. Enhancing the limit of identified metabolites in blood will therefore greatly impact NMR-based metabolomics. Continuing our efforts to address this major issue, our current study describes the identification of 12 metabolites, which expands the number of quantifiable blood metabolites by ~15%. These results, in combination with our earlier efforts, now provide access to nearly 90 metabolites, which is the highest to date for a simple 1D (1)H NMR experiment that is widely used in the metabolomics field. Metabolites were identified based on the comprehensive investigation of human blood and plasma using 1D/2D NMR techniques. The newly identified metabolites were validated based on chemical shift databases, spectra of authentic compounds obtained under conditions identical to blood/plasma, and, finally, spiking experiments using authentic compounds. Considering the high reproducibility of NMR and the sensitivity of chemical shifts to altered sample conditions, experimental protocols and peak annotations are provided for the newly identified metabolites, which serve as a template for identification of blood metabolites for routine applications. Separately, the identified metabolites were evaluated for their sensitivity to preanalytical conditions. The results reveal that among the newly identified metabolites, inosine monophosphate (IMP) and nicotinamide are associated with labile coenzymes and their levels are sensitive to preanalytical conditions. The study demonstrates the expansion of quantifiable blood metabolites using NMR to a new height and is expected to greatly impact blood metabolomics. 2022-12 2022-11-15 /pmc/articles/PMC9757760/ /pubmed/36530463 http://dx.doi.org/10.1016/j.jmro.2022.100082 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Nagana Gowda, G.A.
Pascua, Vadim
Raftery, Daniel
A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title_full A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title_fullStr A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title_full_unstemmed A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title_short A new limit for blood metabolite analysis using (1)H NMR spectroscopy
title_sort new limit for blood metabolite analysis using (1)h nmr spectroscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757760/
https://www.ncbi.nlm.nih.gov/pubmed/36530463
http://dx.doi.org/10.1016/j.jmro.2022.100082
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