Cargando…
GPU-accelerated and pipelined methylation calling
MOTIVATION: The third-generation DNA sequencing technologies, such as Nanopore Sequencing, can operate at very high speeds and produce longer reads, which in turn results in a challenge for the computational analysis of such massive data. Nanopolish is a software package for signal-level analysis of...
Autores principales: | Feng, Yilin, Gudukbay Akbulut, Gulsum, Tang, Xulong, Gunasekaran, Jashwant Raj, Rahman, Amatur, Medvedev, Paul, Kandemir, Mahmut |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9757827/ https://www.ncbi.nlm.nih.gov/pubmed/36699365 http://dx.doi.org/10.1093/bioadv/vbac088 |
Ejemplares similares
-
Assembler artifacts include misassembly because of unsafe unitigs and underassembly because of bidirected graphs
por: Rahman, Amatur, et al.
Publicado: (2022) -
Accelerating Computation of DCM for ERP in MATLAB by External Function Calls to the GPU
por: Wang, Wei-Jen, et al.
Publicado: (2013) -
PERCEPTRON: an open-source GPU-accelerated proteoform identification pipeline for top-down proteomics
por: Khalid, Muhammad Farhan, et al.
Publicado: (2021) -
BiocMAP: a Bioconductor-friendly, GPU-accelerated pipeline for bisulfite-sequencing data
por: Eagles, Nicholas J., et al.
Publicado: (2023) -
DROIDS 1.20: A GUI-Based Pipeline for GPU-Accelerated Comparative Protein Dynamics
por: Babbitt, Gregory A., et al.
Publicado: (2018)