Cargando…

Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China

INTRODUCTION: A facultative anaerobe bacterium Shewanella xiamenensis CQ-Y1 was isolated from the wastewater of Changqing oilfield in Shaanxi Province of China. Shewanella is the important dissimilatory metal-reducing bacteria. It exhibited a well potential application in biodegradation and bioremed...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Jiani, Zhao, Dan, Liu, Tao, Zhang, Shuang, Wang, Weidong, Yan, Lei, Gu, Ji-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9760863/
https://www.ncbi.nlm.nih.gov/pubmed/36545192
http://dx.doi.org/10.3389/fmicb.2022.1028030
_version_ 1784852576422854656
author Yang, Jiani
Zhao, Dan
Liu, Tao
Zhang, Shuang
Wang, Weidong
Yan, Lei
Gu, Ji-Dong
author_facet Yang, Jiani
Zhao, Dan
Liu, Tao
Zhang, Shuang
Wang, Weidong
Yan, Lei
Gu, Ji-Dong
author_sort Yang, Jiani
collection PubMed
description INTRODUCTION: A facultative anaerobe bacterium Shewanella xiamenensis CQ-Y1 was isolated from the wastewater of Changqing oilfield in Shaanxi Province of China. Shewanella is the important dissimilatory metal-reducing bacteria. It exhibited a well potential application in biodegradation and bioremediation. METHODS: Genome sequencing, assembling and functional annotation were conducted to explore the genome information of CQ-Y1. The effect of temperatures and NaCl concentrations on the CQ-Y1 growth and Fe(III) reduction were investigated by UV visible spectrophotometry, SEM and XRD. RESULTS: Genomic analysis revealed its complete genome was a circular chromosome of 4,710,887 bp with a GC content of 46.50% and 4,110 CDSs genes, 86 tRNAs and 26 rRNAs. It contains genes encoding for Na(+)/H(+) antiporter, K(+)/Cl(−) transporter, heat shock protein associated with NaCl and high-temperature resistance. The presence of genes related to flavin, Cytochrome c, siderophore, and other related proteins supported Fe(III) reduction. In addition, CQ-Y1 could survive at 10% NaCl (w/v) and 45°C, and temperature showed more pronounced effects than NaCl concentration on the bacterial growth. The maximum Fe(III) reduction ratio of CQ-Y1 reached 70.1% at 30°C without NaCl, and the reduction reaction remained active at 40°C with 3% NaCl (w/v). NaCl concentration was more effective than temperature on microbial Fe(III) reduction. And the reduction products under high temperature and high NaCl conditions were characterized as Fe(3)(PO(4))(2), FeCl(2) and Fe(OH)(2). DISCUSSION: Accordingly, a Fe(III) reduction mechanism of CQ-Y1 mediated by Cytochrome c and flavin was hypothesised. These findings could provide information for a better understanding of the origin and evolution of genomic and metabolic diversity of S. xiamenensis.
format Online
Article
Text
id pubmed-9760863
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-97608632022-12-20 Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China Yang, Jiani Zhao, Dan Liu, Tao Zhang, Shuang Wang, Weidong Yan, Lei Gu, Ji-Dong Front Microbiol Microbiology INTRODUCTION: A facultative anaerobe bacterium Shewanella xiamenensis CQ-Y1 was isolated from the wastewater of Changqing oilfield in Shaanxi Province of China. Shewanella is the important dissimilatory metal-reducing bacteria. It exhibited a well potential application in biodegradation and bioremediation. METHODS: Genome sequencing, assembling and functional annotation were conducted to explore the genome information of CQ-Y1. The effect of temperatures and NaCl concentrations on the CQ-Y1 growth and Fe(III) reduction were investigated by UV visible spectrophotometry, SEM and XRD. RESULTS: Genomic analysis revealed its complete genome was a circular chromosome of 4,710,887 bp with a GC content of 46.50% and 4,110 CDSs genes, 86 tRNAs and 26 rRNAs. It contains genes encoding for Na(+)/H(+) antiporter, K(+)/Cl(−) transporter, heat shock protein associated with NaCl and high-temperature resistance. The presence of genes related to flavin, Cytochrome c, siderophore, and other related proteins supported Fe(III) reduction. In addition, CQ-Y1 could survive at 10% NaCl (w/v) and 45°C, and temperature showed more pronounced effects than NaCl concentration on the bacterial growth. The maximum Fe(III) reduction ratio of CQ-Y1 reached 70.1% at 30°C without NaCl, and the reduction reaction remained active at 40°C with 3% NaCl (w/v). NaCl concentration was more effective than temperature on microbial Fe(III) reduction. And the reduction products under high temperature and high NaCl conditions were characterized as Fe(3)(PO(4))(2), FeCl(2) and Fe(OH)(2). DISCUSSION: Accordingly, a Fe(III) reduction mechanism of CQ-Y1 mediated by Cytochrome c and flavin was hypothesised. These findings could provide information for a better understanding of the origin and evolution of genomic and metabolic diversity of S. xiamenensis. Frontiers Media S.A. 2022-12-05 /pmc/articles/PMC9760863/ /pubmed/36545192 http://dx.doi.org/10.3389/fmicb.2022.1028030 Text en Copyright © 2022 Yang, Zhao, Liu, Zhang, Wang, Yan and Gu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yang, Jiani
Zhao, Dan
Liu, Tao
Zhang, Shuang
Wang, Weidong
Yan, Lei
Gu, Ji-Dong
Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title_full Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title_fullStr Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title_full_unstemmed Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title_short Growth and genome-based insights of Fe(III) reduction of the high-temperature and NaCl-tolerant Shewanella xiamenensis from Changqing oilfield of China
title_sort growth and genome-based insights of fe(iii) reduction of the high-temperature and nacl-tolerant shewanella xiamenensis from changqing oilfield of china
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9760863/
https://www.ncbi.nlm.nih.gov/pubmed/36545192
http://dx.doi.org/10.3389/fmicb.2022.1028030
work_keys_str_mv AT yangjiani growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT zhaodan growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT liutao growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT zhangshuang growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT wangweidong growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT yanlei growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina
AT gujidong growthandgenomebasedinsightsoffeiiireductionofthehightemperatureandnacltolerantshewanellaxiamenensisfromchangqingoilfieldofchina