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Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters
The adsorption behaviour of the 5-fluorouracil (5FU) on small gold clusters Au( N ) with N = 6, 8, 20 was evaluated by means of density functional theory using the PBE-D3 functional in combination with a mixed basis set, i.e. cc-pVDZ-PP for gold atoms and cc-pVTZ for non-metal elements. The binding...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9760957/ https://www.ncbi.nlm.nih.gov/pubmed/36545217 http://dx.doi.org/10.3389/fchem.2022.1050423 |
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author | Si, Nguyen Thanh Nhat, Pham Vu Nguyen, Minh Tho |
author_facet | Si, Nguyen Thanh Nhat, Pham Vu Nguyen, Minh Tho |
author_sort | Si, Nguyen Thanh |
collection | PubMed |
description | The adsorption behaviour of the 5-fluorouracil (5FU) on small gold clusters Au( N ) with N = 6, 8, 20 was evaluated by means of density functional theory using the PBE-D3 functional in combination with a mixed basis set, i.e. cc-pVDZ-PP for gold atoms and cc-pVTZ for non-metal elements. The binding energies between 5FU and gold clusters were determined in the range of 16–24 and 11–19 kcal/mol in gas-phase and aqueous media, respectively. The corresponding Gibbs energies were found to be around -7 to -10 kcal/mol in vacum and sigificantly reduced to -1 to -6 kcal/mol in water solution, indicating that both the association and dissociation processes are likely spontaneous. An analysis on the charge density difference tends to confirm the existence of a charge transfer from the 5FU molecule to Au atoms. Analysis of the surface-enhanced Raman scattering (SERS) spectra of 5FU adsorbed on the Au surfaces shows that the stretching vibrations of N−H and C=O bonds play a major role in the SERS phenomenon. A mechanism for the drug releasing from the gold surfaces is also proposed. The process is triggered by either the low pH in cancerous tumors or the presence of cysteine residues in protein matrices. |
format | Online Article Text |
id | pubmed-9760957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97609572022-12-20 Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters Si, Nguyen Thanh Nhat, Pham Vu Nguyen, Minh Tho Front Chem Chemistry The adsorption behaviour of the 5-fluorouracil (5FU) on small gold clusters Au( N ) with N = 6, 8, 20 was evaluated by means of density functional theory using the PBE-D3 functional in combination with a mixed basis set, i.e. cc-pVDZ-PP for gold atoms and cc-pVTZ for non-metal elements. The binding energies between 5FU and gold clusters were determined in the range of 16–24 and 11–19 kcal/mol in gas-phase and aqueous media, respectively. The corresponding Gibbs energies were found to be around -7 to -10 kcal/mol in vacum and sigificantly reduced to -1 to -6 kcal/mol in water solution, indicating that both the association and dissociation processes are likely spontaneous. An analysis on the charge density difference tends to confirm the existence of a charge transfer from the 5FU molecule to Au atoms. Analysis of the surface-enhanced Raman scattering (SERS) spectra of 5FU adsorbed on the Au surfaces shows that the stretching vibrations of N−H and C=O bonds play a major role in the SERS phenomenon. A mechanism for the drug releasing from the gold surfaces is also proposed. The process is triggered by either the low pH in cancerous tumors or the presence of cysteine residues in protein matrices. Frontiers Media S.A. 2022-12-05 /pmc/articles/PMC9760957/ /pubmed/36545217 http://dx.doi.org/10.3389/fchem.2022.1050423 Text en Copyright © 2022 Si, Nhat and Nguyen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Chemistry Si, Nguyen Thanh Nhat, Pham Vu Nguyen, Minh Tho Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title | Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title_full | Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title_fullStr | Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title_full_unstemmed | Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title_short | Binding mechanism and SERS spectra of 5-fluorouracil on gold clusters |
title_sort | binding mechanism and sers spectra of 5-fluorouracil on gold clusters |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9760957/ https://www.ncbi.nlm.nih.gov/pubmed/36545217 http://dx.doi.org/10.3389/fchem.2022.1050423 |
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