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DNA methylation patterns associated with konzo in Sub-Saharan Africa

Konzo, a disease characterized by sudden, irreversible spastic paraparesis, affecting up to 10% of the population in some regions of Sub-Saharan Africa during outbreaks, is strongly associated with dietary exposure to cyanogenic bitter cassava. The molecular mechanisms underlying the development of...

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Autores principales: Kocher, Kristen, Bhattacharya, Surajit, Bramble, Matthew S., Okitundu-Luwa, Daniel, Ngoyi, Dieudonne Mumba, Tshala-Katumbay, Desire, Vilain, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9764695/
https://www.ncbi.nlm.nih.gov/pubmed/36536449
http://dx.doi.org/10.1186/s13148-022-01372-x
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author Kocher, Kristen
Bhattacharya, Surajit
Bramble, Matthew S.
Okitundu-Luwa, Daniel
Ngoyi, Dieudonne Mumba
Tshala-Katumbay, Desire
Vilain, Eric
author_facet Kocher, Kristen
Bhattacharya, Surajit
Bramble, Matthew S.
Okitundu-Luwa, Daniel
Ngoyi, Dieudonne Mumba
Tshala-Katumbay, Desire
Vilain, Eric
author_sort Kocher, Kristen
collection PubMed
description Konzo, a disease characterized by sudden, irreversible spastic paraparesis, affecting up to 10% of the population in some regions of Sub-Saharan Africa during outbreaks, is strongly associated with dietary exposure to cyanogenic bitter cassava. The molecular mechanisms underlying the development of konzo remain largely unknown. Here, through an analysis of 16 individuals with konzo and matched healthy controls from the same outbreak zones, we identified 117 differentially methylated loci involved in numerous biological processes that may identify cyanogenic-sensitive regions of the genome, providing the first study of epigenomic alterations associated with a clinical phenotype of konzo. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13148-022-01372-x.
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spelling pubmed-97646952022-12-21 DNA methylation patterns associated with konzo in Sub-Saharan Africa Kocher, Kristen Bhattacharya, Surajit Bramble, Matthew S. Okitundu-Luwa, Daniel Ngoyi, Dieudonne Mumba Tshala-Katumbay, Desire Vilain, Eric Clin Epigenetics Brief Report Konzo, a disease characterized by sudden, irreversible spastic paraparesis, affecting up to 10% of the population in some regions of Sub-Saharan Africa during outbreaks, is strongly associated with dietary exposure to cyanogenic bitter cassava. The molecular mechanisms underlying the development of konzo remain largely unknown. Here, through an analysis of 16 individuals with konzo and matched healthy controls from the same outbreak zones, we identified 117 differentially methylated loci involved in numerous biological processes that may identify cyanogenic-sensitive regions of the genome, providing the first study of epigenomic alterations associated with a clinical phenotype of konzo. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13148-022-01372-x. BioMed Central 2022-12-19 /pmc/articles/PMC9764695/ /pubmed/36536449 http://dx.doi.org/10.1186/s13148-022-01372-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Brief Report
Kocher, Kristen
Bhattacharya, Surajit
Bramble, Matthew S.
Okitundu-Luwa, Daniel
Ngoyi, Dieudonne Mumba
Tshala-Katumbay, Desire
Vilain, Eric
DNA methylation patterns associated with konzo in Sub-Saharan Africa
title DNA methylation patterns associated with konzo in Sub-Saharan Africa
title_full DNA methylation patterns associated with konzo in Sub-Saharan Africa
title_fullStr DNA methylation patterns associated with konzo in Sub-Saharan Africa
title_full_unstemmed DNA methylation patterns associated with konzo in Sub-Saharan Africa
title_short DNA methylation patterns associated with konzo in Sub-Saharan Africa
title_sort dna methylation patterns associated with konzo in sub-saharan africa
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9764695/
https://www.ncbi.nlm.nih.gov/pubmed/36536449
http://dx.doi.org/10.1186/s13148-022-01372-x
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