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An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases

Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-res...

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Autores principales: Oner, Mustafa Umit, Ng, Mei Ying, Giron, Danilo Medina, Chen Xi, Cecilia Ee, Yuan Xiang, Louis Ang, Singh, Malay, Yu, Weimiao, Sung, Wing-Kin, Wong, Chin Fong, Lee, Hwee Kuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768677/
https://www.ncbi.nlm.nih.gov/pubmed/36569545
http://dx.doi.org/10.1016/j.patter.2022.100642
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author Oner, Mustafa Umit
Ng, Mei Ying
Giron, Danilo Medina
Chen Xi, Cecilia Ee
Yuan Xiang, Louis Ang
Singh, Malay
Yu, Weimiao
Sung, Wing-Kin
Wong, Chin Fong
Lee, Hwee Kuan
author_facet Oner, Mustafa Umit
Ng, Mei Ying
Giron, Danilo Medina
Chen Xi, Cecilia Ee
Yuan Xiang, Louis Ang
Singh, Malay
Yu, Weimiao
Sung, Wing-Kin
Wong, Chin Fong
Lee, Hwee Kuan
author_sort Oner, Mustafa Umit
collection PubMed
description Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-resolution deep-learning pipeline to assist pathologists in detecting malignant glands in core needle biopsies of low-grade and low-volume cases. Analyzing a gland at multiple resolutions, our model exploited morphology and neighborhood information, which were crucial in prostate gland classification. We developed and tested our pipeline on the slides of a local cohort of 99 patients in Singapore. Besides, we made the images publicly available, becoming the first digital histopathology dataset of patients of Asian ancestry with prostatic carcinoma. Our multi-resolution classification model achieved an area under the receiver operating characteristic curve (AUROC) value of 0.992 (95% confidence interval [CI]: 0.985–0.997) in the external validation study, showing the generalizability of our multi-resolution approach.
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spelling pubmed-97686772022-12-22 An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases Oner, Mustafa Umit Ng, Mei Ying Giron, Danilo Medina Chen Xi, Cecilia Ee Yuan Xiang, Louis Ang Singh, Malay Yu, Weimiao Sung, Wing-Kin Wong, Chin Fong Lee, Hwee Kuan Patterns (N Y) Article Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-resolution deep-learning pipeline to assist pathologists in detecting malignant glands in core needle biopsies of low-grade and low-volume cases. Analyzing a gland at multiple resolutions, our model exploited morphology and neighborhood information, which were crucial in prostate gland classification. We developed and tested our pipeline on the slides of a local cohort of 99 patients in Singapore. Besides, we made the images publicly available, becoming the first digital histopathology dataset of patients of Asian ancestry with prostatic carcinoma. Our multi-resolution classification model achieved an area under the receiver operating characteristic curve (AUROC) value of 0.992 (95% confidence interval [CI]: 0.985–0.997) in the external validation study, showing the generalizability of our multi-resolution approach. Elsevier 2022-11-29 /pmc/articles/PMC9768677/ /pubmed/36569545 http://dx.doi.org/10.1016/j.patter.2022.100642 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Oner, Mustafa Umit
Ng, Mei Ying
Giron, Danilo Medina
Chen Xi, Cecilia Ee
Yuan Xiang, Louis Ang
Singh, Malay
Yu, Weimiao
Sung, Wing-Kin
Wong, Chin Fong
Lee, Hwee Kuan
An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title_full An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title_fullStr An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title_full_unstemmed An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title_short An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
title_sort ai-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768677/
https://www.ncbi.nlm.nih.gov/pubmed/36569545
http://dx.doi.org/10.1016/j.patter.2022.100642
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