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An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases
Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-res...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768677/ https://www.ncbi.nlm.nih.gov/pubmed/36569545 http://dx.doi.org/10.1016/j.patter.2022.100642 |
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author | Oner, Mustafa Umit Ng, Mei Ying Giron, Danilo Medina Chen Xi, Cecilia Ee Yuan Xiang, Louis Ang Singh, Malay Yu, Weimiao Sung, Wing-Kin Wong, Chin Fong Lee, Hwee Kuan |
author_facet | Oner, Mustafa Umit Ng, Mei Ying Giron, Danilo Medina Chen Xi, Cecilia Ee Yuan Xiang, Louis Ang Singh, Malay Yu, Weimiao Sung, Wing-Kin Wong, Chin Fong Lee, Hwee Kuan |
author_sort | Oner, Mustafa Umit |
collection | PubMed |
description | Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-resolution deep-learning pipeline to assist pathologists in detecting malignant glands in core needle biopsies of low-grade and low-volume cases. Analyzing a gland at multiple resolutions, our model exploited morphology and neighborhood information, which were crucial in prostate gland classification. We developed and tested our pipeline on the slides of a local cohort of 99 patients in Singapore. Besides, we made the images publicly available, becoming the first digital histopathology dataset of patients of Asian ancestry with prostatic carcinoma. Our multi-resolution classification model achieved an area under the receiver operating characteristic curve (AUROC) value of 0.992 (95% confidence interval [CI]: 0.985–0.997) in the external validation study, showing the generalizability of our multi-resolution approach. |
format | Online Article Text |
id | pubmed-9768677 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-97686772022-12-22 An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases Oner, Mustafa Umit Ng, Mei Ying Giron, Danilo Medina Chen Xi, Cecilia Ee Yuan Xiang, Louis Ang Singh, Malay Yu, Weimiao Sung, Wing-Kin Wong, Chin Fong Lee, Hwee Kuan Patterns (N Y) Article Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-resolution deep-learning pipeline to assist pathologists in detecting malignant glands in core needle biopsies of low-grade and low-volume cases. Analyzing a gland at multiple resolutions, our model exploited morphology and neighborhood information, which were crucial in prostate gland classification. We developed and tested our pipeline on the slides of a local cohort of 99 patients in Singapore. Besides, we made the images publicly available, becoming the first digital histopathology dataset of patients of Asian ancestry with prostatic carcinoma. Our multi-resolution classification model achieved an area under the receiver operating characteristic curve (AUROC) value of 0.992 (95% confidence interval [CI]: 0.985–0.997) in the external validation study, showing the generalizability of our multi-resolution approach. Elsevier 2022-11-29 /pmc/articles/PMC9768677/ /pubmed/36569545 http://dx.doi.org/10.1016/j.patter.2022.100642 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Oner, Mustafa Umit Ng, Mei Ying Giron, Danilo Medina Chen Xi, Cecilia Ee Yuan Xiang, Louis Ang Singh, Malay Yu, Weimiao Sung, Wing-Kin Wong, Chin Fong Lee, Hwee Kuan An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title | An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title_full | An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title_fullStr | An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title_full_unstemmed | An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title_short | An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
title_sort | ai-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768677/ https://www.ncbi.nlm.nih.gov/pubmed/36569545 http://dx.doi.org/10.1016/j.patter.2022.100642 |
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