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Biomolecular condensate phase diagrams with a combinatorial microdroplet platform
The assembly of biomolecules into condensates is a fundamental process underlying the organisation of the intracellular space and the regulation of many cellular functions. Mapping and characterising phase behaviour of biomolecules is essential to understand the mechanisms of condensate assembly, an...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768726/ https://www.ncbi.nlm.nih.gov/pubmed/36543777 http://dx.doi.org/10.1038/s41467-022-35265-7 |
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author | Arter, William E. Qi, Runzhang Erkamp, Nadia A. Krainer, Georg Didi, Kieran Welsh, Timothy J. Acker, Julia Nixon-Abell, Jonathan Qamar, Seema Guillén-Boixet, Jordina Franzmann, Titus M. Kuster, David Hyman, Anthony A. Borodavka, Alexander George-Hyslop, Peter St Alberti, Simon Knowles, Tuomas P. J. |
author_facet | Arter, William E. Qi, Runzhang Erkamp, Nadia A. Krainer, Georg Didi, Kieran Welsh, Timothy J. Acker, Julia Nixon-Abell, Jonathan Qamar, Seema Guillén-Boixet, Jordina Franzmann, Titus M. Kuster, David Hyman, Anthony A. Borodavka, Alexander George-Hyslop, Peter St Alberti, Simon Knowles, Tuomas P. J. |
author_sort | Arter, William E. |
collection | PubMed |
description | The assembly of biomolecules into condensates is a fundamental process underlying the organisation of the intracellular space and the regulation of many cellular functions. Mapping and characterising phase behaviour of biomolecules is essential to understand the mechanisms of condensate assembly, and to develop therapeutic strategies targeting biomolecular condensate systems. A central concept for characterising phase-separating systems is the phase diagram. Phase diagrams are typically built from numerous individual measurements sampling different parts of the parameter space. However, even when performed in microwell plate format, this process is slow, low throughput and requires significant sample consumption. To address this challenge, we present here a combinatorial droplet microfluidic platform, termed PhaseScan, for rapid and high-resolution acquisition of multidimensional biomolecular phase diagrams. Using this platform, we characterise the phase behaviour of a wide range of systems under a variety of conditions and demonstrate that this approach allows the quantitative characterisation of the effect of small molecules on biomolecular phase transitions. |
format | Online Article Text |
id | pubmed-9768726 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97687262022-12-21 Biomolecular condensate phase diagrams with a combinatorial microdroplet platform Arter, William E. Qi, Runzhang Erkamp, Nadia A. Krainer, Georg Didi, Kieran Welsh, Timothy J. Acker, Julia Nixon-Abell, Jonathan Qamar, Seema Guillén-Boixet, Jordina Franzmann, Titus M. Kuster, David Hyman, Anthony A. Borodavka, Alexander George-Hyslop, Peter St Alberti, Simon Knowles, Tuomas P. J. Nat Commun Article The assembly of biomolecules into condensates is a fundamental process underlying the organisation of the intracellular space and the regulation of many cellular functions. Mapping and characterising phase behaviour of biomolecules is essential to understand the mechanisms of condensate assembly, and to develop therapeutic strategies targeting biomolecular condensate systems. A central concept for characterising phase-separating systems is the phase diagram. Phase diagrams are typically built from numerous individual measurements sampling different parts of the parameter space. However, even when performed in microwell plate format, this process is slow, low throughput and requires significant sample consumption. To address this challenge, we present here a combinatorial droplet microfluidic platform, termed PhaseScan, for rapid and high-resolution acquisition of multidimensional biomolecular phase diagrams. Using this platform, we characterise the phase behaviour of a wide range of systems under a variety of conditions and demonstrate that this approach allows the quantitative characterisation of the effect of small molecules on biomolecular phase transitions. Nature Publishing Group UK 2022-12-21 /pmc/articles/PMC9768726/ /pubmed/36543777 http://dx.doi.org/10.1038/s41467-022-35265-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Arter, William E. Qi, Runzhang Erkamp, Nadia A. Krainer, Georg Didi, Kieran Welsh, Timothy J. Acker, Julia Nixon-Abell, Jonathan Qamar, Seema Guillén-Boixet, Jordina Franzmann, Titus M. Kuster, David Hyman, Anthony A. Borodavka, Alexander George-Hyslop, Peter St Alberti, Simon Knowles, Tuomas P. J. Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title | Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title_full | Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title_fullStr | Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title_full_unstemmed | Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title_short | Biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
title_sort | biomolecular condensate phase diagrams with a combinatorial microdroplet platform |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768726/ https://www.ncbi.nlm.nih.gov/pubmed/36543777 http://dx.doi.org/10.1038/s41467-022-35265-7 |
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