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Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning
BACKGROUND: Beta amyloid in the brain, which was originally confirmed by post-mortem examinations, can now be confirmed in living patients using amyloid positron emission tomography (PET) tracers, and the accuracy of diagnosis can be improved by beta amyloid plaque confirmation in patients. Amyloid...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768895/ https://www.ncbi.nlm.nih.gov/pubmed/36539779 http://dx.doi.org/10.1186/s12938-022-01058-8 |
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author | Ryu, Chan Ju |
author_facet | Ryu, Chan Ju |
author_sort | Ryu, Chan Ju |
collection | PubMed |
description | BACKGROUND: Beta amyloid in the brain, which was originally confirmed by post-mortem examinations, can now be confirmed in living patients using amyloid positron emission tomography (PET) tracers, and the accuracy of diagnosis can be improved by beta amyloid plaque confirmation in patients. Amyloid deposition in the brain is often associated with the expression of dementia. Hence, it is important to identify the anatomically and functionally meaningful areas of the human brain cortex surface using PET to diagnose the possibility of developing dementia. In this study, we demonstrated the validity of automated (18)F-flutemetamol PET lesion detection and segmentation based on a complete 2D U-Net convolutional neural network via masking treatment strategies. METHODS: PET data were first normalized by volume and divided into five amyloid accumulation zones through axial, coronary, and thalamic slices. A single U-Net was trained using a divided dataset for one of these zones. Ground truth segmentations were obtained by manual delineation and thresholding (1.5 × background). RESULTS: The following intersection over union values were obtained for the various slices in the verification dataset: frontal lobe axial/sagittal: 0.733/0.804; posterior cingulate cortex and precuneus coronal/sagittal: 0.661/0.726; lateral temporal lobe axial/coronal: 0.864/0.892; parietal lobe axial/coronal: 0.542/0.759; and striatum axial/sagittal: 0.679/0.752. The U-Net convolutional neural network architecture allowed fully automated 2D division of the (18)F-flutemetamol PET brain images of Alzheimer's patients. CONCLUSIONS: As dementia should be tested and evaluated in various ways, there is a need for artificial intelligence programs. This study can serve as a reference for future studies using auxiliary roles and research in Alzheimer's diagnosis. |
format | Online Article Text |
id | pubmed-9768895 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-97688952022-12-22 Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning Ryu, Chan Ju Biomed Eng Online Research BACKGROUND: Beta amyloid in the brain, which was originally confirmed by post-mortem examinations, can now be confirmed in living patients using amyloid positron emission tomography (PET) tracers, and the accuracy of diagnosis can be improved by beta amyloid plaque confirmation in patients. Amyloid deposition in the brain is often associated with the expression of dementia. Hence, it is important to identify the anatomically and functionally meaningful areas of the human brain cortex surface using PET to diagnose the possibility of developing dementia. In this study, we demonstrated the validity of automated (18)F-flutemetamol PET lesion detection and segmentation based on a complete 2D U-Net convolutional neural network via masking treatment strategies. METHODS: PET data were first normalized by volume and divided into five amyloid accumulation zones through axial, coronary, and thalamic slices. A single U-Net was trained using a divided dataset for one of these zones. Ground truth segmentations were obtained by manual delineation and thresholding (1.5 × background). RESULTS: The following intersection over union values were obtained for the various slices in the verification dataset: frontal lobe axial/sagittal: 0.733/0.804; posterior cingulate cortex and precuneus coronal/sagittal: 0.661/0.726; lateral temporal lobe axial/coronal: 0.864/0.892; parietal lobe axial/coronal: 0.542/0.759; and striatum axial/sagittal: 0.679/0.752. The U-Net convolutional neural network architecture allowed fully automated 2D division of the (18)F-flutemetamol PET brain images of Alzheimer's patients. CONCLUSIONS: As dementia should be tested and evaluated in various ways, there is a need for artificial intelligence programs. This study can serve as a reference for future studies using auxiliary roles and research in Alzheimer's diagnosis. BioMed Central 2022-12-20 /pmc/articles/PMC9768895/ /pubmed/36539779 http://dx.doi.org/10.1186/s12938-022-01058-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Ryu, Chan Ju Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title | Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title_full | Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title_fullStr | Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title_full_unstemmed | Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title_short | Automatic lesion detection and segmentation in (18)F-flutemetamol positron emission tomography images using deep learning |
title_sort | automatic lesion detection and segmentation in (18)f-flutemetamol positron emission tomography images using deep learning |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9768895/ https://www.ncbi.nlm.nih.gov/pubmed/36539779 http://dx.doi.org/10.1186/s12938-022-01058-8 |
work_keys_str_mv | AT ryuchanju automaticlesiondetectionandsegmentationin18fflutemetamolpositronemissiontomographyimagesusingdeeplearning |