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Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer

Pyroptosis is a kind of programmed cell death related to inflammation, which is closely related to cancer. The goal of this study is to establish and verify pyroptosis-related gene signature to predict the prognosis of patients with bladder cancer (BLCA) and explore its relationship with immunity. S...

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Autores principales: Du, Xiaoyi, Zhao, Xin, Tang, Yu, Tang, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9771655/
https://www.ncbi.nlm.nih.gov/pubmed/36569221
http://dx.doi.org/10.1155/2022/6429993
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author Du, Xiaoyi
Zhao, Xin
Tang, Yu
Tang, Wei
author_facet Du, Xiaoyi
Zhao, Xin
Tang, Yu
Tang, Wei
author_sort Du, Xiaoyi
collection PubMed
description Pyroptosis is a kind of programmed cell death related to inflammation, which is closely related to cancer. The goal of this study is to establish and verify pyroptosis-related gene signature to predict the prognosis of patients with bladder cancer (BLCA) and explore its relationship with immunity. Somatic mutation, copy number variation, correlation, and expression of 33 pyroptosis-related genes were evaluated based on The Cancer Genome Atlas (TCGA) database. BLCA cases were divided into two clusters by consistent clustering and found that pyroptosis-related genes were related to the overall survival (OS) of BLCA. The least absolute shrinkage and selection operator (LASSO) Cox regression was used to construct the signature (including 7 pyroptosis-realated genes). Survival analysis curve and receiver operating characteristic curve (ROC) showed that this signature could predict the prognosis of BLCA patients. Univariate and multivariate Cox regression analysis showed the independent prognostic value of this model. Immune infiltration analysis showed that the six types of immune cells have significantly different infiltrations. The effect of immunotherapy is better in the low-risk group. In summary, our effort indicated the potential role of pyroptosis-related genes in BLCA and provided new perspectives on the prognosis of BLCA and new ideas for immunotherapy.
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spelling pubmed-97716552022-12-22 Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer Du, Xiaoyi Zhao, Xin Tang, Yu Tang, Wei Dis Markers Research Article Pyroptosis is a kind of programmed cell death related to inflammation, which is closely related to cancer. The goal of this study is to establish and verify pyroptosis-related gene signature to predict the prognosis of patients with bladder cancer (BLCA) and explore its relationship with immunity. Somatic mutation, copy number variation, correlation, and expression of 33 pyroptosis-related genes were evaluated based on The Cancer Genome Atlas (TCGA) database. BLCA cases were divided into two clusters by consistent clustering and found that pyroptosis-related genes were related to the overall survival (OS) of BLCA. The least absolute shrinkage and selection operator (LASSO) Cox regression was used to construct the signature (including 7 pyroptosis-realated genes). Survival analysis curve and receiver operating characteristic curve (ROC) showed that this signature could predict the prognosis of BLCA patients. Univariate and multivariate Cox regression analysis showed the independent prognostic value of this model. Immune infiltration analysis showed that the six types of immune cells have significantly different infiltrations. The effect of immunotherapy is better in the low-risk group. In summary, our effort indicated the potential role of pyroptosis-related genes in BLCA and provided new perspectives on the prognosis of BLCA and new ideas for immunotherapy. Hindawi 2022-12-14 /pmc/articles/PMC9771655/ /pubmed/36569221 http://dx.doi.org/10.1155/2022/6429993 Text en Copyright © 2022 Xiaoyi Du et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Du, Xiaoyi
Zhao, Xin
Tang, Yu
Tang, Wei
Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title_full Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title_fullStr Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title_full_unstemmed Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title_short Construction of Pyroptosis-Related Prognostic and Immune Infiltration Signature in Bladder Cancer
title_sort construction of pyroptosis-related prognostic and immune infiltration signature in bladder cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9771655/
https://www.ncbi.nlm.nih.gov/pubmed/36569221
http://dx.doi.org/10.1155/2022/6429993
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