Cargando…
The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis)
Oxybenzone (OBZ), one of a broad spectrum of ultraviolet (UV) absorbents, has been proven to be harmful to both plants and animals, while omics analysis of big data at the molecular level is still lacking. Lysine succinylation (Ksuc) is an important posttranslational modification of proteins that pl...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9772522/ https://www.ncbi.nlm.nih.gov/pubmed/36570927 http://dx.doi.org/10.3389/fpls.2022.1001935 |
_version_ | 1784854996723957760 |
---|---|
author | Li, Shuhao Zhou, Yuqi Xu, Yang Ran, Shengxiang Hou, Maomao Li, Qingming Zhong, Xin Zhong, Fenglin |
author_facet | Li, Shuhao Zhou, Yuqi Xu, Yang Ran, Shengxiang Hou, Maomao Li, Qingming Zhong, Xin Zhong, Fenglin |
author_sort | Li, Shuhao |
collection | PubMed |
description | Oxybenzone (OBZ), one of a broad spectrum of ultraviolet (UV) absorbents, has been proven to be harmful to both plants and animals, while omics analysis of big data at the molecular level is still lacking. Lysine succinylation (Ksuc) is an important posttranslational modification of proteins that plays a crucial role in regulating the metabolic network in organisms under stress. Here, we report the changes in intracellular Ksuc modification in plants under OBZ stress. A total of 1276 succinylated sites on 507 proteins were identified. Among these sites, 181 modified proteins were hypersulfinylated/succinylated in OBZ-stressed pakchoi leaves. Differentially succinylated proteins (DSPs) are distributed mainly in the chloroplast, cytoplasm, and mitochondria and are distributed mainly in primary metabolic pathways, such as reactive oxygen species (ROS) scavenging, stress resistance, energy generation and transfer, photosynthetic carbon fixation, glycolysis, and the tricarboxylic acid (TCA) cycle. Comprehensive analysis shows that Ksuc mainly changes the carbon flow distribution, enhances the activity of the antioxidant system, affects the biosynthesis of amino acids, and increases the modification of histones. The results of this study first showed the profiling of the Kusc map under OBZ treatment and proposed the adaptive mechanism of pakchoi in response to pollutants and other abiotic stresses at the posttranslational level, which revealed the importance of Ksuc in the regulation of various life activities and provides a reference dataset for future research on molecular function. |
format | Online Article Text |
id | pubmed-9772522 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97725222022-12-23 The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) Li, Shuhao Zhou, Yuqi Xu, Yang Ran, Shengxiang Hou, Maomao Li, Qingming Zhong, Xin Zhong, Fenglin Front Plant Sci Plant Science Oxybenzone (OBZ), one of a broad spectrum of ultraviolet (UV) absorbents, has been proven to be harmful to both plants and animals, while omics analysis of big data at the molecular level is still lacking. Lysine succinylation (Ksuc) is an important posttranslational modification of proteins that plays a crucial role in regulating the metabolic network in organisms under stress. Here, we report the changes in intracellular Ksuc modification in plants under OBZ stress. A total of 1276 succinylated sites on 507 proteins were identified. Among these sites, 181 modified proteins were hypersulfinylated/succinylated in OBZ-stressed pakchoi leaves. Differentially succinylated proteins (DSPs) are distributed mainly in the chloroplast, cytoplasm, and mitochondria and are distributed mainly in primary metabolic pathways, such as reactive oxygen species (ROS) scavenging, stress resistance, energy generation and transfer, photosynthetic carbon fixation, glycolysis, and the tricarboxylic acid (TCA) cycle. Comprehensive analysis shows that Ksuc mainly changes the carbon flow distribution, enhances the activity of the antioxidant system, affects the biosynthesis of amino acids, and increases the modification of histones. The results of this study first showed the profiling of the Kusc map under OBZ treatment and proposed the adaptive mechanism of pakchoi in response to pollutants and other abiotic stresses at the posttranslational level, which revealed the importance of Ksuc in the regulation of various life activities and provides a reference dataset for future research on molecular function. Frontiers Media S.A. 2022-12-08 /pmc/articles/PMC9772522/ /pubmed/36570927 http://dx.doi.org/10.3389/fpls.2022.1001935 Text en Copyright © 2022 Li, Zhou, Xu, Ran, Hou, Li, Zhong and Zhong https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Li, Shuhao Zhou, Yuqi Xu, Yang Ran, Shengxiang Hou, Maomao Li, Qingming Zhong, Xin Zhong, Fenglin The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title | The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title_full | The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title_fullStr | The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title_full_unstemmed | The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title_short | The analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (Brassica rapa L. ssp. chinensis) |
title_sort | analysis of lysine succinylation modification reveals the mechanism of oxybenzone damaging of pakchoi (brassica rapa l. ssp. chinensis) |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9772522/ https://www.ncbi.nlm.nih.gov/pubmed/36570927 http://dx.doi.org/10.3389/fpls.2022.1001935 |
work_keys_str_mv | AT lishuhao theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhouyuqi theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT xuyang theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT ranshengxiang theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT houmaomao theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT liqingming theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhongxin theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhongfenglin theanalysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT lishuhao analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhouyuqi analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT xuyang analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT ranshengxiang analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT houmaomao analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT liqingming analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhongxin analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis AT zhongfenglin analysisoflysinesuccinylationmodificationrevealsthemechanismofoxybenzonedamagingofpakchoibrassicarapalsspchinensis |