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Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury

Spinal cord injury (SCI) leads to severe functional deficits. Currently, there are no available pharmacological treatments to promote neurological recovery in SCI patients. Recent work from our group has shown that a baclofen treatment can promote functional recovery after a compression SCI in mice...

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Autores principales: de Sousa, Nidia, Robledo, Diego, González-Llera, Laura, Pinho, Andreia G., Santos, Diogo J., Monteiro, Susana, Campos, Jonas, Cibrão, Jorge R., Silva, Nuno A., Sánchez, Laura, Salgado, António J., Barreiro-Iglesias, Antón
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9772790/
https://www.ncbi.nlm.nih.gov/pubmed/36569535
http://dx.doi.org/10.1016/j.dib.2022.108809
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author de Sousa, Nidia
Robledo, Diego
González-Llera, Laura
Pinho, Andreia G.
Santos, Diogo J.
Monteiro, Susana
Campos, Jonas
Cibrão, Jorge R.
Silva, Nuno A.
Sánchez, Laura
Salgado, António J.
Barreiro-Iglesias, Antón
author_facet de Sousa, Nidia
Robledo, Diego
González-Llera, Laura
Pinho, Andreia G.
Santos, Diogo J.
Monteiro, Susana
Campos, Jonas
Cibrão, Jorge R.
Silva, Nuno A.
Sánchez, Laura
Salgado, António J.
Barreiro-Iglesias, Antón
author_sort de Sousa, Nidia
collection PubMed
description Spinal cord injury (SCI) leads to severe functional deficits. Currently, there are no available pharmacological treatments to promote neurological recovery in SCI patients. Recent work from our group has shown that a baclofen treatment can promote functional recovery after a compression SCI in mice [1]. Here, we provide transcriptomic (RNA-seq) data from adult mouse spinal cords collected 7 days after a compression SCI and baclofen (vs vehicle) administration. The Illumina NovaSeq 6000 platform was used to generate the raw transcriptomic data. In addition, we also present bioinformatic analyses including differential gene expression analysis, enrichment analyses for various functional annotations (gene ontology, KEGG and BioCarta pathways or InterPro domains) and transcription factor targets. The raw RNA-seq data has been uploaded to the NCBI Sequence Read Archive (SRA) database (Bioproject ID PRJNA886048). The data generated from the bioinformatic analyses is contained within the article.
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spelling pubmed-97727902022-12-23 Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury de Sousa, Nidia Robledo, Diego González-Llera, Laura Pinho, Andreia G. Santos, Diogo J. Monteiro, Susana Campos, Jonas Cibrão, Jorge R. Silva, Nuno A. Sánchez, Laura Salgado, António J. Barreiro-Iglesias, Antón Data Brief Data Article Spinal cord injury (SCI) leads to severe functional deficits. Currently, there are no available pharmacological treatments to promote neurological recovery in SCI patients. Recent work from our group has shown that a baclofen treatment can promote functional recovery after a compression SCI in mice [1]. Here, we provide transcriptomic (RNA-seq) data from adult mouse spinal cords collected 7 days after a compression SCI and baclofen (vs vehicle) administration. The Illumina NovaSeq 6000 platform was used to generate the raw transcriptomic data. In addition, we also present bioinformatic analyses including differential gene expression analysis, enrichment analyses for various functional annotations (gene ontology, KEGG and BioCarta pathways or InterPro domains) and transcription factor targets. The raw RNA-seq data has been uploaded to the NCBI Sequence Read Archive (SRA) database (Bioproject ID PRJNA886048). The data generated from the bioinformatic analyses is contained within the article. Elsevier 2022-12-07 /pmc/articles/PMC9772790/ /pubmed/36569535 http://dx.doi.org/10.1016/j.dib.2022.108809 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data Article
de Sousa, Nidia
Robledo, Diego
González-Llera, Laura
Pinho, Andreia G.
Santos, Diogo J.
Monteiro, Susana
Campos, Jonas
Cibrão, Jorge R.
Silva, Nuno A.
Sánchez, Laura
Salgado, António J.
Barreiro-Iglesias, Antón
Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title_full Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title_fullStr Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title_full_unstemmed Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title_short Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury
title_sort spinal cord rna-seq data after a baclofen treatment in mice with a spinal cord injury
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9772790/
https://www.ncbi.nlm.nih.gov/pubmed/36569535
http://dx.doi.org/10.1016/j.dib.2022.108809
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