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T-cell repertoire diversity: friend or foe for protective antitumor response?

Profiling the T-Cell Receptor (TCR) repertoire is establishing as a potent approach to investigate autologous and treatment-induced antitumor immune response. Technical and computational breakthroughs, including high throughput next-generation sequencing (NGS) approaches and spatial transcriptomics,...

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Autores principales: Porciello, Nicla, Franzese, Ornella, D’Ambrosio, Lorenzo, Palermo, Belinda, Nisticò, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9773533/
https://www.ncbi.nlm.nih.gov/pubmed/36550555
http://dx.doi.org/10.1186/s13046-022-02566-0
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author Porciello, Nicla
Franzese, Ornella
D’Ambrosio, Lorenzo
Palermo, Belinda
Nisticò, Paola
author_facet Porciello, Nicla
Franzese, Ornella
D’Ambrosio, Lorenzo
Palermo, Belinda
Nisticò, Paola
author_sort Porciello, Nicla
collection PubMed
description Profiling the T-Cell Receptor (TCR) repertoire is establishing as a potent approach to investigate autologous and treatment-induced antitumor immune response. Technical and computational breakthroughs, including high throughput next-generation sequencing (NGS) approaches and spatial transcriptomics, are providing unprecedented insight into the mechanisms underlying antitumor immunity. A precise spatiotemporal variation of T-cell repertoire, which dynamically mirrors the functional state of the evolving host-cancer interaction, allows the tracking of the T-cell populations at play, and may identify the key cells responsible for tumor eradication, the evaluation of minimal residual disease and the identification of biomarkers of response to immunotherapy. In this review we will discuss the relationship between global metrics characterizing the TCR repertoire such as T-cell clonality and diversity and the resultant functional responses. In particular, we will explore how specific TCR repertoires in cancer patients can be predictive of prognosis or response to therapy and in particular how a given TCR re-arrangement, following immunotherapy, can predict a specific clinical outcome. Finally, we will examine current improvements in terms of T-cell sequencing, discussing advantages and challenges of current methodologies.
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spelling pubmed-97735332022-12-23 T-cell repertoire diversity: friend or foe for protective antitumor response? Porciello, Nicla Franzese, Ornella D’Ambrosio, Lorenzo Palermo, Belinda Nisticò, Paola J Exp Clin Cancer Res Review Profiling the T-Cell Receptor (TCR) repertoire is establishing as a potent approach to investigate autologous and treatment-induced antitumor immune response. Technical and computational breakthroughs, including high throughput next-generation sequencing (NGS) approaches and spatial transcriptomics, are providing unprecedented insight into the mechanisms underlying antitumor immunity. A precise spatiotemporal variation of T-cell repertoire, which dynamically mirrors the functional state of the evolving host-cancer interaction, allows the tracking of the T-cell populations at play, and may identify the key cells responsible for tumor eradication, the evaluation of minimal residual disease and the identification of biomarkers of response to immunotherapy. In this review we will discuss the relationship between global metrics characterizing the TCR repertoire such as T-cell clonality and diversity and the resultant functional responses. In particular, we will explore how specific TCR repertoires in cancer patients can be predictive of prognosis or response to therapy and in particular how a given TCR re-arrangement, following immunotherapy, can predict a specific clinical outcome. Finally, we will examine current improvements in terms of T-cell sequencing, discussing advantages and challenges of current methodologies. BioMed Central 2022-12-22 /pmc/articles/PMC9773533/ /pubmed/36550555 http://dx.doi.org/10.1186/s13046-022-02566-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
Porciello, Nicla
Franzese, Ornella
D’Ambrosio, Lorenzo
Palermo, Belinda
Nisticò, Paola
T-cell repertoire diversity: friend or foe for protective antitumor response?
title T-cell repertoire diversity: friend or foe for protective antitumor response?
title_full T-cell repertoire diversity: friend or foe for protective antitumor response?
title_fullStr T-cell repertoire diversity: friend or foe for protective antitumor response?
title_full_unstemmed T-cell repertoire diversity: friend or foe for protective antitumor response?
title_short T-cell repertoire diversity: friend or foe for protective antitumor response?
title_sort t-cell repertoire diversity: friend or foe for protective antitumor response?
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9773533/
https://www.ncbi.nlm.nih.gov/pubmed/36550555
http://dx.doi.org/10.1186/s13046-022-02566-0
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