Cargando…

ABP-Finder: A Tool to Identify Antibacterial Peptides and the Gram-Staining Type of Targeted Bacteria

Multi-drug resistance in bacteria is a major health problem worldwide. To overcome this issue, new approaches allowing for the identification and development of antibacterial agents are urgently needed. Peptides, due to their binding specificity and low expected side effects, are promising candidate...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ruiz-Blanco, Yasser B., Agüero-Chapin, Guillermin, Romero-Molina, Sandra, Antunes, Agostinho, Olari, Lia-Raluca, Spellerberg, Barbara, Münch, Jan, Sanchez-Garcia, Elsa
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9774453/ https://www.ncbi.nlm.nih.gov/pubmed/36551365 http://dx.doi.org/10.3390/antibiotics11121708

Ejemplares similares

A 2022 Update on Computational Approaches to the Discovery and Design of Antimicrobial Peptides
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2023)

Exploring general-purpose protein features for distinguishing enzymes and non-enzymes within the twilight zone
por: Ruiz-Blanco, Yasser B., et al.
Publicado: (2017)

Surveying alignment-free features for Ortholog detection in related yeast proteomes by using supervised big data classifiers
por: Galpert, Deborah, et al.
Publicado: (2018)

Respiratory ß-2-Microglobulin exerts pH dependent antimicrobial activity
por: Holch, Armin, et al.
Publicado: (2020)

Exploring the Adenylation Domain Repertoire of Nonribosomal Peptide Synthetases Using an Ensemble of Sequence-Search Methods
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2013)

An Effective Big Data Supervised Imbalanced Classification Approach for Ortholog Detection in Related Yeast Species
por: Galpert, Deborah, et al.
Publicado: (2015)

A Placenta Derived C-Terminal Fragment of β-Hemoglobin With Combined Antibacterial and Antiviral Activity
por: Groß, Rüdiger, et al.
Publicado: (2020)

Graph Theory-Based Sequence Descriptors as Remote Homology Predictors
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2019)

An Alignment-Free Approach for Eukaryotic ITS2 Annotation and Phylogenetic Inference
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2011)

The bacteriocin Angicin interferes with bacterial membrane integrity through interaction with the mannose phosphotransferase system
por: Vogel, Verena, et al.
Publicado: (2022)

Shotgun Proteomics of Ascidians Tunic Gives New Insights on Host–Microbe Interactions by Revealing Diverse Antimicrobial Peptides
por: Matos, Ana, et al.
Publicado: (2020)

Putative Antimicrobial Peptides of the Posterior Salivary Glands from the Cephalopod Octopus vulgaris Revealed by Exploring a Composite Protein Database
por: Almeida, Daniela, et al.
Publicado: (2020)

A Novel Network Science and Similarity-Searching-Based Approach for Discovering Potential Tumor-Homing Peptides from Antimicrobials
por: Romero, Maylin, et al.
Publicado: (2022)

Fuzzy spherical truncation-based multi-linear protein descriptors: From their definition to application in structural-related predictions
por: Contreras-Torres, Ernesto, et al.
Publicado: (2022)

ShadowCaster: Compositional Methods under the Shadow of Phylogenetic Models to Detect Horizontal Gene Transfers in Prokaryotes
por: Sánchez-Soto, Daniela, et al.
Publicado: (2020)

Emerging Computational Approaches for Antimicrobial Peptide Discovery
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2022)

Network Science and Group Fusion Similarity-Based Searching to Explore the Chemical Space of Antiparasitic Peptides
por: Ayala-Ruano, Sebastián, et al.
Publicado: (2022)

Absence of the CXCR4 antagonist EPI-X4 from pharmaceutical human serum albumin preparations
por: Gilg, Andrea, et al.
Publicado: (2021)

Gram's Stain Revisited
por: Soper, David E.
Publicado: (1995)

Automatic generation of gene finders for eukaryotic species
por: Munch, Kasper, et al.
Publicado: (2006)

Antibacterial properties of Acinetobacter baumanniiphage Abp1 endolysin (PlyAB1)
por: Huang, Guangtao, et al.
Publicado: (2014)

An optimized staining technique for the detection of Gram positive and Gram negative bacteria within tissue
por: Becerra, Sandra C., et al.
Publicado: (2016)

EFFECT OF SILICATE ON GRAM STAINING AND VIABILITY OF PNEUMOCOCCI AND OTHER BACTERIA
por: MacLeod, Colin M., et al.
Publicado: (1956)

Report from the ABP Computing Working Group (ABP-CWG) activities in 2017-18
por: Rumolo, Giovanni, et al.
Publicado: (2018)

Complex Networks Analyses of Antibiofilm Peptides: An Emerging Tool for Next-Generation Antimicrobials’ Discovery
por: Agüero-Chapin, Guillermin, et al.
Publicado: (2023)

Development of a standardized Gram stain procedure for bacteria and inflammatory cells using an automated staining instrument
por: Li, Hui, et al.
Publicado: (2020)

Gram-Positive Diplococci in a Cerebrospinal Fluid Gram Stain
por: Collins, Jennifer P., et al.
Publicado: (2016)

Gram-Positive Rods on a Cerebrospinal Fluid Gram Stain
por: Thompson, Amelia B, et al.
Publicado: (2017)

PPG2ABP: Translating Photoplethysmogram (PPG) Signals to Arterial Blood Pressure (ABP) Waveforms
por: Ibtehaz, Nabil, et al.
Publicado: (2022)

Gram Staining for the Treatment of Peritonsillar Abscess
por: Takenaka, Yukinori, et al.
Publicado: (2012)

A METHOD OF DIFFERENTIATING IN SECTIONS OF TISSUE BACTERIA DECOLORIZED BY GRAM'S STAIN
por: Duval, Charles W.
Publicado: (1907)

285. Evaluation of the ePlex® Blood Culture Identification (BCID) Panels for Gram-positive/Gram-negative bacteria and yeasts
por: Chapin, Kimberle, et al.
Publicado: (2020)

Complementation of the embryo-lethal T-DNA insertion mutant of AUXIN-BINDING-PROTEIN 1 (ABP1) with abp1 point mutated versions reveals crosstalk of ABP1 and phytochromes
por: Effendi, Yunus, et al.
Publicado: (2015)

Antibacterial Activity of Colloidal Silver against Gram-Negative and Gram-Positive Bacteria
por: Vila Domínguez, Andrea, et al.
Publicado: (2020)

Campylobacter enterocolitis diagnosed by stool Gram stain
por: Nakagawa, Hidenori, et al.
Publicado: (2017)

The Diagnosis of Secondary Syphilis by Gram and Giemsa Staining
por: Sekikawa, Yoshiyuki, et al.
Publicado: (2017)

Sputum Gram stain of hypervirulent Klebsiella pneumoniae
por: Nishihara, Yuji, et al.
Publicado: (2023)

Enhanced Antibacterial Activity of Acinetobacter baumannii Bacteriophage ØABP-01 Endolysin (LysABP-01) in Combination with Colistin
por: Thummeepak, Rapee, et al.
Publicado: (2016)

Effect of Photodynamic Antibacterial Chemotherapy Combined with Antibiotics on Gram-Positive and Gram-Negative Bacteria
por: Ilizirov, Yana, et al.
Publicado: (2018)

Virucidal activity of SARS-CoV-2 rapid antigen extraction buffers
por: Conzelmann, Carina, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_sf8evs0ponl8a9a801r06i4842