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Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis
[Image: see text] Metal-dependent formate dehydrogenases are important enzymes due to their activity of CO(2) reduction to formate. The tungsten-containing FdhAB formate dehydrogenase from Desulfovibrio vulgaris Hildenborough is a good example displaying high activity, simple composition, and a nota...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9774666/ https://www.ncbi.nlm.nih.gov/pubmed/35766974 http://dx.doi.org/10.1021/acschembio.2c00336 |
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author | Oliveira, Ana Rita Mota, Cristiano Klymanska, Kateryna Biaso, Frédéric Romão, Maria João Guigliarelli, Bruno Pereira, Inês Cardoso |
author_facet | Oliveira, Ana Rita Mota, Cristiano Klymanska, Kateryna Biaso, Frédéric Romão, Maria João Guigliarelli, Bruno Pereira, Inês Cardoso |
author_sort | Oliveira, Ana Rita |
collection | PubMed |
description | [Image: see text] Metal-dependent formate dehydrogenases are important enzymes due to their activity of CO(2) reduction to formate. The tungsten-containing FdhAB formate dehydrogenase from Desulfovibrio vulgaris Hildenborough is a good example displaying high activity, simple composition, and a notable structural and catalytic robustness. Here, we report the first spectroscopic redox characterization of FdhAB metal centers by EPR. Titration with dithionite or formate leads to reduction of three [4Fe–4S](1+) clusters, and full reduction requires Ti(III)–citrate. The redox potentials of the four [4Fe–4S](1+) centers range between −250 and −530 mV. Two distinct W(V) signals were detected, W(D)(V) and W(F)(V), which differ in only the g(2)-value. This difference can be explained by small variations in the twist angle of the two pyranopterins, as determined through DFT calculations of model compounds. The redox potential of W(VI/V) was determined to be −370 mV when reduced by dithionite and −340 mV when reduced by formate. The crystal structure of dithionite-reduced FdhAB was determined at high resolution (1.5 Å), revealing the same structural alterations as reported for the formate-reduced structure. These results corroborate a stable six-ligand W coordination in the catalytic intermediate W(V) state of FdhAB. |
format | Online Article Text |
id | pubmed-9774666 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-97746662022-12-23 Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis Oliveira, Ana Rita Mota, Cristiano Klymanska, Kateryna Biaso, Frédéric Romão, Maria João Guigliarelli, Bruno Pereira, Inês Cardoso ACS Chem Biol [Image: see text] Metal-dependent formate dehydrogenases are important enzymes due to their activity of CO(2) reduction to formate. The tungsten-containing FdhAB formate dehydrogenase from Desulfovibrio vulgaris Hildenborough is a good example displaying high activity, simple composition, and a notable structural and catalytic robustness. Here, we report the first spectroscopic redox characterization of FdhAB metal centers by EPR. Titration with dithionite or formate leads to reduction of three [4Fe–4S](1+) clusters, and full reduction requires Ti(III)–citrate. The redox potentials of the four [4Fe–4S](1+) centers range between −250 and −530 mV. Two distinct W(V) signals were detected, W(D)(V) and W(F)(V), which differ in only the g(2)-value. This difference can be explained by small variations in the twist angle of the two pyranopterins, as determined through DFT calculations of model compounds. The redox potential of W(VI/V) was determined to be −370 mV when reduced by dithionite and −340 mV when reduced by formate. The crystal structure of dithionite-reduced FdhAB was determined at high resolution (1.5 Å), revealing the same structural alterations as reported for the formate-reduced structure. These results corroborate a stable six-ligand W coordination in the catalytic intermediate W(V) state of FdhAB. American Chemical Society 2022-06-29 2022-07-15 /pmc/articles/PMC9774666/ /pubmed/35766974 http://dx.doi.org/10.1021/acschembio.2c00336 Text en © 2022 American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Oliveira, Ana Rita Mota, Cristiano Klymanska, Kateryna Biaso, Frédéric Romão, Maria João Guigliarelli, Bruno Pereira, Inês Cardoso Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis |
title | Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB
Reveals Stable Metal Coordination during Catalysis |
title_full | Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB
Reveals Stable Metal Coordination during Catalysis |
title_fullStr | Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB
Reveals Stable Metal Coordination during Catalysis |
title_full_unstemmed | Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB
Reveals Stable Metal Coordination during Catalysis |
title_short | Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB
Reveals Stable Metal Coordination during Catalysis |
title_sort | spectroscopic and structural characterization of reduced desulfovibrio vulgaris hildenborough w-fdhab
reveals stable metal coordination during catalysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9774666/ https://www.ncbi.nlm.nih.gov/pubmed/35766974 http://dx.doi.org/10.1021/acschembio.2c00336 |
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