Cargando…

A Novel Capsule Network with Attention Routing to Identify Prokaryote Phosphorylation Sites

By denaturing proteins and promoting the formation of multiprotein complexes, protein phosphorylation has important effects on the activity of protein functional molecules and cell signaling. The regulation of protein phosphorylation allows microbes to respond rapidly and reversibly to specific envi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Shixian, Zhang, Lina, Yang, Runtao, Zhao, Yujiao
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9775645/ https://www.ncbi.nlm.nih.gov/pubmed/36551282 http://dx.doi.org/10.3390/biom12121854

Ejemplares similares

Efficient-CapsNet: capsule network with self-attention routing
por: Mazzia, Vittorio, et al.
Publicado: (2021)

dbPSP: a curated database for protein phosphorylation sites in prokaryotes
por: Pan, Zhicheng, et al.
Publicado: (2015)

dbPSP 2.0, an updated database of protein phosphorylation sites in prokaryotes
por: Shi, Ying, et al.
Publicado: (2020)

A Novel Feature Extraction Method with Feature Selection to Identify Golgi-Resident Protein Types from Imbalanced Data
por: Yang, Runtao, et al.
Publicado: (2016)

Using a Classifier Fusion Strategy to Identify Anti-angiogenic Peptides
por: Zhang, Lina, et al.
Publicado: (2018)

Rumor detection driven by graph attention capsule network on dynamic propagation structures
por: Yang, Peng, et al.
Publicado: (2022)

An Ensemble Method with Hybrid Features to Identify Extracellular Matrix Proteins
por: Yang, Runtao, et al.
Publicado: (2015)

Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention
por: Smith, Zachary, et al.
Publicado: (2023)

DA-CapsNet: dual attention mechanism capsule network
por: Huang, Wenkai, et al.
Publicado: (2020)

Biomedical document triage using a hierarchical attention-based capsule network
por: Wang, Jian, et al.
Publicado: (2020)

A deep learning framework combined with word embedding to identify DNA replication origins
por: Wu, Feng, et al.
Publicado: (2021)

PPNet: Identifying Functional Association Networks by Phylogenetic Profiling of Prokaryotic Genomes
por: Li, Yangjie, et al.
Publicado: (2023)

Novel Video Surveillance-Based Fire and Smoke Classification Using Attentional Feature Map in Capsule Networks
por: Shakhnoza, Muksimova, et al.
Publicado: (2021)

Few-Shot network intrusion detection based on prototypical capsule network with attention mechanism
por: Sun, Handi, et al.
Publicado: (2023)

Indirect Routes to Aminoacyl-tRNA: The Diversity of Prokaryotic Cysteine Encoding Systems
por: Mukai, Takahito, et al.
Publicado: (2022)

A Novel Prokaryotic Promoter Identified in the Genome of Some Monopartite Begomoviruses
por: Wang, Wei-Chen, et al.
Publicado: (2013)

iEnhancer-GAN: A Deep Learning Framework in Combination with Word Embedding and Sequence Generative Adversarial Net to Identify Enhancers and Their Strength
por: Yang, Runtao, et al.
Publicado: (2021)

Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes
por: Makita, Yuko, et al.
Publicado: (2007)

Attentional Routes to Conscious Perception
por: Chica, Ana B., et al.
Publicado: (2012)

DCAMCP: A deep learning model based on capsule network and attention mechanism for molecular carcinogenicity prediction
por: Chen, Zhe, et al.
Publicado: (2023)

Multiple evolutionary routes of the single polar capsule in Thelohanellus species (Myxozoa; Myxobolidae)
por: Zhang, Xiuping, et al.
Publicado: (2018)

DPDH-CapNet: A Novel Lightweight Capsule Network with Non-routing for COVID-19 Diagnosis Using X-ray Images
por: Yuan, Jianjun, et al.
Publicado: (2023)

Systematic Analysis and Prediction of Pupylation Sites in Prokaryotic Proteins
por: Chen, Xiang, et al.
Publicado: (2013)

Distribution and diversity of ribosome binding sites in prokaryotic genomes
por: Omotajo, Damilola, et al.
Publicado: (2015)

Attention-Guided Huber Loss for Head Pose Estimation Based on Improved Capsule Network
por: Zhong, Runhao, et al.
Publicado: (2023)

Separated Channel Attention Convolutional Neural Network (SC-CNN-Attention) to Identify ADHD in Multi-Site Rs-fMRI Dataset
por: Zhang, Tao, et al.
Publicado: (2020)

IPs-GRUAtt: An attention-based bidirectional gated recurrent unit network for predicting phosphorylation sites of SARS-CoV-2 infection
por: Zhang, Guiyang, et al.
Publicado: (2023)

A capsule network-based method for identifying transcription factors
por: Zheng, Peijie, et al.
Publicado: (2022)

Shared Sulfur Mobilization Routes for tRNA Thiolation and Molybdenum Cofactor Biosynthesis in Prokaryotes and Eukaryotes
por: Leimkühler, Silke, et al.
Publicado: (2017)

Melanoma Recognition by Fusing Convolutional Blocks and Dynamic Routing between Capsules
por: Pérez, Eduardo, et al.
Publicado: (2021)

Label-Free Raman Microspectroscopy for Identifying Prokaryotic Virocells
por: Monsees, Indra, et al.
Publicado: (2022)

Attention enhanced capsule network for text classification by encoding syntactic dependency trees with graph convolutional neural network
por: Jia, Xudong, et al.
Publicado: (2022)

Prodigal: prokaryotic gene recognition and translation initiation site identification
por: Hyatt, Doug, et al.
Publicado: (2010)

Ensemble Capsule Network with an Attention Mechanism for the Fault Diagnosis of Bearings from Imbalanced Data Samples
por: Xu, Zengbing, et al.
Publicado: (2022)

ACSN: Attention capsule sampling network for diagnosing COVID-19 based on chest CT scans
por: Wen, Cuihong, et al.
Publicado: (2023)

Novel sites for pacemaker lead implantation and different routes for their extraction
por: de Groot, J. R.
Publicado: (2022)

A novel graph convolutional neural network for predicting interaction sites on protein kinase inhibitors in phosphorylation
por: Wang, Feiqi, et al.
Publicado: (2022)

A Hyperspectral Image Classification Method Based on the Nonlocal Attention Mechanism of a Multiscale Convolutional Neural Network
por: Li, Mingtian, et al.
Publicado: (2023)

A measure of identifying influential waypoints in air route networks
por: Ren, Guangjian, et al.
Publicado: (2018)

Identifying Protein Phosphorylation Sites with Kinase Substrate Specificity on Human Viruses
por: Bretaña, Neil Arvin, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_76uia2um7gd5adkd8dg9d6jo6b