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Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for t...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9775719/ https://www.ncbi.nlm.nih.gov/pubmed/36551032 http://dx.doi.org/10.3390/bios12121065 |
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author | Tabarov, Artem Vitkin, Vladimir Andreeva, Olga Shemanaeva, Arina Popov, Evgeniy Dobroslavin, Alexander Kurikova, Valeria Kuznetsova, Olga Grigorenko, Konstantin Tzibizov, Ivan Kovalev, Anton Savchenko, Vitaliy Zheltuhina, Alyona Gorshkov, Andrey Danilenko, Daria |
author_facet | Tabarov, Artem Vitkin, Vladimir Andreeva, Olga Shemanaeva, Arina Popov, Evgeniy Dobroslavin, Alexander Kurikova, Valeria Kuznetsova, Olga Grigorenko, Konstantin Tzibizov, Ivan Kovalev, Anton Savchenko, Vitaliy Zheltuhina, Alyona Gorshkov, Andrey Danilenko, Daria |
author_sort | Tabarov, Artem |
collection | PubMed |
description | We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for their straight classification and detection. Machine learning technologies (particularly, the support vector machine method) enabled the differentiation of samples containing influenza A and B viruses using SERS with an accuracy of 93% at a concentration of 200 μg/mL. The minimum detectable concentration of the virus in the sample using the proposed approach was ~0.05 μg/mL of protein (according to the Lowry protein assay), and the detection accuracy of a sample with this pathogen concentration was 84%. |
format | Online Article Text |
id | pubmed-9775719 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-97757192022-12-23 Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning Tabarov, Artem Vitkin, Vladimir Andreeva, Olga Shemanaeva, Arina Popov, Evgeniy Dobroslavin, Alexander Kurikova, Valeria Kuznetsova, Olga Grigorenko, Konstantin Tzibizov, Ivan Kovalev, Anton Savchenko, Vitaliy Zheltuhina, Alyona Gorshkov, Andrey Danilenko, Daria Biosensors (Basel) Article We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for their straight classification and detection. Machine learning technologies (particularly, the support vector machine method) enabled the differentiation of samples containing influenza A and B viruses using SERS with an accuracy of 93% at a concentration of 200 μg/mL. The minimum detectable concentration of the virus in the sample using the proposed approach was ~0.05 μg/mL of protein (according to the Lowry protein assay), and the detection accuracy of a sample with this pathogen concentration was 84%. MDPI 2022-11-23 /pmc/articles/PMC9775719/ /pubmed/36551032 http://dx.doi.org/10.3390/bios12121065 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tabarov, Artem Vitkin, Vladimir Andreeva, Olga Shemanaeva, Arina Popov, Evgeniy Dobroslavin, Alexander Kurikova, Valeria Kuznetsova, Olga Grigorenko, Konstantin Tzibizov, Ivan Kovalev, Anton Savchenko, Vitaliy Zheltuhina, Alyona Gorshkov, Andrey Danilenko, Daria Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title | Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title_full | Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title_fullStr | Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title_full_unstemmed | Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title_short | Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning |
title_sort | detection of a and b influenza viruses by surface-enhanced raman scattering spectroscopy and machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9775719/ https://www.ncbi.nlm.nih.gov/pubmed/36551032 http://dx.doi.org/10.3390/bios12121065 |
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