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Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning

We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for t...

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Autores principales: Tabarov, Artem, Vitkin, Vladimir, Andreeva, Olga, Shemanaeva, Arina, Popov, Evgeniy, Dobroslavin, Alexander, Kurikova, Valeria, Kuznetsova, Olga, Grigorenko, Konstantin, Tzibizov, Ivan, Kovalev, Anton, Savchenko, Vitaliy, Zheltuhina, Alyona, Gorshkov, Andrey, Danilenko, Daria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9775719/
https://www.ncbi.nlm.nih.gov/pubmed/36551032
http://dx.doi.org/10.3390/bios12121065
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author Tabarov, Artem
Vitkin, Vladimir
Andreeva, Olga
Shemanaeva, Arina
Popov, Evgeniy
Dobroslavin, Alexander
Kurikova, Valeria
Kuznetsova, Olga
Grigorenko, Konstantin
Tzibizov, Ivan
Kovalev, Anton
Savchenko, Vitaliy
Zheltuhina, Alyona
Gorshkov, Andrey
Danilenko, Daria
author_facet Tabarov, Artem
Vitkin, Vladimir
Andreeva, Olga
Shemanaeva, Arina
Popov, Evgeniy
Dobroslavin, Alexander
Kurikova, Valeria
Kuznetsova, Olga
Grigorenko, Konstantin
Tzibizov, Ivan
Kovalev, Anton
Savchenko, Vitaliy
Zheltuhina, Alyona
Gorshkov, Andrey
Danilenko, Daria
author_sort Tabarov, Artem
collection PubMed
description We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for their straight classification and detection. Machine learning technologies (particularly, the support vector machine method) enabled the differentiation of samples containing influenza A and B viruses using SERS with an accuracy of 93% at a concentration of 200 μg/mL. The minimum detectable concentration of the virus in the sample using the proposed approach was ~0.05 μg/mL of protein (according to the Lowry protein assay), and the detection accuracy of a sample with this pathogen concentration was 84%.
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spelling pubmed-97757192022-12-23 Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning Tabarov, Artem Vitkin, Vladimir Andreeva, Olga Shemanaeva, Arina Popov, Evgeniy Dobroslavin, Alexander Kurikova, Valeria Kuznetsova, Olga Grigorenko, Konstantin Tzibizov, Ivan Kovalev, Anton Savchenko, Vitaliy Zheltuhina, Alyona Gorshkov, Andrey Danilenko, Daria Biosensors (Basel) Article We demonstrate the possibility of applying surface-enhanced Raman spectroscopy (SERS) combined with machine learning technology to detect and differentiate influenza type A and B viruses in a buffer environment. The SERS spectra of the influenza viruses do not possess specific peaks that allow for their straight classification and detection. Machine learning technologies (particularly, the support vector machine method) enabled the differentiation of samples containing influenza A and B viruses using SERS with an accuracy of 93% at a concentration of 200 μg/mL. The minimum detectable concentration of the virus in the sample using the proposed approach was ~0.05 μg/mL of protein (according to the Lowry protein assay), and the detection accuracy of a sample with this pathogen concentration was 84%. MDPI 2022-11-23 /pmc/articles/PMC9775719/ /pubmed/36551032 http://dx.doi.org/10.3390/bios12121065 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tabarov, Artem
Vitkin, Vladimir
Andreeva, Olga
Shemanaeva, Arina
Popov, Evgeniy
Dobroslavin, Alexander
Kurikova, Valeria
Kuznetsova, Olga
Grigorenko, Konstantin
Tzibizov, Ivan
Kovalev, Anton
Savchenko, Vitaliy
Zheltuhina, Alyona
Gorshkov, Andrey
Danilenko, Daria
Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title_full Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title_fullStr Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title_full_unstemmed Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title_short Detection of A and B Influenza Viruses by Surface-Enhanced Raman Scattering Spectroscopy and Machine Learning
title_sort detection of a and b influenza viruses by surface-enhanced raman scattering spectroscopy and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9775719/
https://www.ncbi.nlm.nih.gov/pubmed/36551032
http://dx.doi.org/10.3390/bios12121065
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