Cargando…

A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods

Among the leading causes of mortality and morbidity in people are lung and colon cancers. They may develop concurrently in organs and negatively impact human life. If cancer is not diagnosed in its early stages, there is a great likelihood that it will spread to the two organs. The histopathological...

Descripción completa

Detalles Bibliográficos
Autores principales: Attallah, Omneya, Aslan, Muhammet Fatih, Sabanci, Kadir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9776637/
https://www.ncbi.nlm.nih.gov/pubmed/36552933
http://dx.doi.org/10.3390/diagnostics12122926
_version_ 1784855913707864064
author Attallah, Omneya
Aslan, Muhammet Fatih
Sabanci, Kadir
author_facet Attallah, Omneya
Aslan, Muhammet Fatih
Sabanci, Kadir
author_sort Attallah, Omneya
collection PubMed
description Among the leading causes of mortality and morbidity in people are lung and colon cancers. They may develop concurrently in organs and negatively impact human life. If cancer is not diagnosed in its early stages, there is a great likelihood that it will spread to the two organs. The histopathological detection of such malignancies is one of the most crucial components of effective treatment. Although the process is lengthy and complex, deep learning (DL) techniques have made it feasible to complete it more quickly and accurately, enabling researchers to study a lot more patients in a short time period and for a lot less cost. Earlier studies relied on DL models that require great computational ability and resources. Most of them depended on individual DL models to extract features of high dimension or to perform diagnoses. However, in this study, a framework based on multiple lightweight DL models is proposed for the early detection of lung and colon cancers. The framework utilizes several transformation methods that perform feature reduction and provide a better representation of the data. In this context, histopathology scans are fed into the ShuffleNet, MobileNet, and SqueezeNet models. The number of deep features acquired from these models is subsequently reduced using principal component analysis (PCA) and fast Walsh–Hadamard transform (FHWT) techniques. Following that, discrete wavelet transform (DWT) is used to fuse the FWHT’s reduced features obtained from the three DL models. Additionally, the three DL models’ PCA features are concatenated. Finally, the diminished features as a result of PCA and FHWT-DWT reduction and fusion processes are fed to four distinct machine learning algorithms, reaching the highest accuracy of 99.6%. The results obtained using the proposed framework based on lightweight DL models show that it can distinguish lung and colon cancer variants with a lower number of features and less computational complexity compared to existing methods. They also prove that utilizing transformation methods to reduce features can offer a superior interpretation of the data, thus improving the diagnosis procedure.
format Online
Article
Text
id pubmed-9776637
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-97766372022-12-23 A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods Attallah, Omneya Aslan, Muhammet Fatih Sabanci, Kadir Diagnostics (Basel) Article Among the leading causes of mortality and morbidity in people are lung and colon cancers. They may develop concurrently in organs and negatively impact human life. If cancer is not diagnosed in its early stages, there is a great likelihood that it will spread to the two organs. The histopathological detection of such malignancies is one of the most crucial components of effective treatment. Although the process is lengthy and complex, deep learning (DL) techniques have made it feasible to complete it more quickly and accurately, enabling researchers to study a lot more patients in a short time period and for a lot less cost. Earlier studies relied on DL models that require great computational ability and resources. Most of them depended on individual DL models to extract features of high dimension or to perform diagnoses. However, in this study, a framework based on multiple lightweight DL models is proposed for the early detection of lung and colon cancers. The framework utilizes several transformation methods that perform feature reduction and provide a better representation of the data. In this context, histopathology scans are fed into the ShuffleNet, MobileNet, and SqueezeNet models. The number of deep features acquired from these models is subsequently reduced using principal component analysis (PCA) and fast Walsh–Hadamard transform (FHWT) techniques. Following that, discrete wavelet transform (DWT) is used to fuse the FWHT’s reduced features obtained from the three DL models. Additionally, the three DL models’ PCA features are concatenated. Finally, the diminished features as a result of PCA and FHWT-DWT reduction and fusion processes are fed to four distinct machine learning algorithms, reaching the highest accuracy of 99.6%. The results obtained using the proposed framework based on lightweight DL models show that it can distinguish lung and colon cancer variants with a lower number of features and less computational complexity compared to existing methods. They also prove that utilizing transformation methods to reduce features can offer a superior interpretation of the data, thus improving the diagnosis procedure. MDPI 2022-11-23 /pmc/articles/PMC9776637/ /pubmed/36552933 http://dx.doi.org/10.3390/diagnostics12122926 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Attallah, Omneya
Aslan, Muhammet Fatih
Sabanci, Kadir
A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title_full A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title_fullStr A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title_full_unstemmed A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title_short A Framework for Lung and Colon Cancer Diagnosis via Lightweight Deep Learning Models and Transformation Methods
title_sort framework for lung and colon cancer diagnosis via lightweight deep learning models and transformation methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9776637/
https://www.ncbi.nlm.nih.gov/pubmed/36552933
http://dx.doi.org/10.3390/diagnostics12122926
work_keys_str_mv AT attallahomneya aframeworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods
AT aslanmuhammetfatih aframeworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods
AT sabancikadir aframeworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods
AT attallahomneya frameworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods
AT aslanmuhammetfatih frameworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods
AT sabancikadir frameworkforlungandcoloncancerdiagnosisvialightweightdeeplearningmodelsandtransformationmethods