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A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility
While the role of common genetic variants in multiple sclerosis (MS) has been elucidated in large genome-wide association studies, the contribution of rare variants to the disease remains unclear. Herein, a whole-genome sequencing study in four affected and four healthy relatives of a consanguineous...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9777893/ https://www.ncbi.nlm.nih.gov/pubmed/36553660 http://dx.doi.org/10.3390/genes13122392 |
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author | Esposito, Federica Osiceanu, Ana Maria Sorosina, Melissa Ottoboni, Linda Bollman, Bryan Santoro, Silvia Bettegazzi, Barbara Zauli, Andrea Clarelli, Ferdinando Mascia, Elisabetta Calabria, Andrea Zacchetti, Daniele Capra, Ruggero Ferrari, Maurizio Provero, Paolo Lazarevic, Dejan Cittaro, Davide Carrera, Paola Patsopoulos, Nikolaos Toniolo, Daniela Sadovnick, A Dessa Martino, Gianvito De Jager, Philip L. Comi, Giancarlo Stupka, Elia Vilariño-Güell, Carles Piccio, Laura Martinelli Boneschi, Filippo |
author_facet | Esposito, Federica Osiceanu, Ana Maria Sorosina, Melissa Ottoboni, Linda Bollman, Bryan Santoro, Silvia Bettegazzi, Barbara Zauli, Andrea Clarelli, Ferdinando Mascia, Elisabetta Calabria, Andrea Zacchetti, Daniele Capra, Ruggero Ferrari, Maurizio Provero, Paolo Lazarevic, Dejan Cittaro, Davide Carrera, Paola Patsopoulos, Nikolaos Toniolo, Daniela Sadovnick, A Dessa Martino, Gianvito De Jager, Philip L. Comi, Giancarlo Stupka, Elia Vilariño-Güell, Carles Piccio, Laura Martinelli Boneschi, Filippo |
author_sort | Esposito, Federica |
collection | PubMed |
description | While the role of common genetic variants in multiple sclerosis (MS) has been elucidated in large genome-wide association studies, the contribution of rare variants to the disease remains unclear. Herein, a whole-genome sequencing study in four affected and four healthy relatives of a consanguineous Italian family identified a novel missense c.1801T > C (p.S601P) variant in the GRAMD1B gene that is shared within MS cases and resides under a linkage peak (LOD: 2.194). Sequencing GRAMD1B in 91 familial MS cases revealed two additional rare missense and two splice-site variants, two of which (rs755488531 and rs769527838) were not found in 1000 Italian healthy controls. Functional studies demonstrated that GRAMD1B, a gene with unknown function in the central nervous system (CNS), is expressed by several cell types, including astrocytes, microglia and neurons as well as by peripheral monocytes and macrophages. Notably, GRAMD1B was downregulated in vessel-associated astrocytes of active MS lesions in autopsied brains and by inflammatory stimuli in peripheral monocytes, suggesting a possible role in the modulation of inflammatory response and disease pathophysiology. |
format | Online Article Text |
id | pubmed-9777893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-97778932022-12-23 A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility Esposito, Federica Osiceanu, Ana Maria Sorosina, Melissa Ottoboni, Linda Bollman, Bryan Santoro, Silvia Bettegazzi, Barbara Zauli, Andrea Clarelli, Ferdinando Mascia, Elisabetta Calabria, Andrea Zacchetti, Daniele Capra, Ruggero Ferrari, Maurizio Provero, Paolo Lazarevic, Dejan Cittaro, Davide Carrera, Paola Patsopoulos, Nikolaos Toniolo, Daniela Sadovnick, A Dessa Martino, Gianvito De Jager, Philip L. Comi, Giancarlo Stupka, Elia Vilariño-Güell, Carles Piccio, Laura Martinelli Boneschi, Filippo Genes (Basel) Article While the role of common genetic variants in multiple sclerosis (MS) has been elucidated in large genome-wide association studies, the contribution of rare variants to the disease remains unclear. Herein, a whole-genome sequencing study in four affected and four healthy relatives of a consanguineous Italian family identified a novel missense c.1801T > C (p.S601P) variant in the GRAMD1B gene that is shared within MS cases and resides under a linkage peak (LOD: 2.194). Sequencing GRAMD1B in 91 familial MS cases revealed two additional rare missense and two splice-site variants, two of which (rs755488531 and rs769527838) were not found in 1000 Italian healthy controls. Functional studies demonstrated that GRAMD1B, a gene with unknown function in the central nervous system (CNS), is expressed by several cell types, including astrocytes, microglia and neurons as well as by peripheral monocytes and macrophages. Notably, GRAMD1B was downregulated in vessel-associated astrocytes of active MS lesions in autopsied brains and by inflammatory stimuli in peripheral monocytes, suggesting a possible role in the modulation of inflammatory response and disease pathophysiology. MDPI 2022-12-16 /pmc/articles/PMC9777893/ /pubmed/36553660 http://dx.doi.org/10.3390/genes13122392 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Esposito, Federica Osiceanu, Ana Maria Sorosina, Melissa Ottoboni, Linda Bollman, Bryan Santoro, Silvia Bettegazzi, Barbara Zauli, Andrea Clarelli, Ferdinando Mascia, Elisabetta Calabria, Andrea Zacchetti, Daniele Capra, Ruggero Ferrari, Maurizio Provero, Paolo Lazarevic, Dejan Cittaro, Davide Carrera, Paola Patsopoulos, Nikolaos Toniolo, Daniela Sadovnick, A Dessa Martino, Gianvito De Jager, Philip L. Comi, Giancarlo Stupka, Elia Vilariño-Güell, Carles Piccio, Laura Martinelli Boneschi, Filippo A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title | A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title_full | A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title_fullStr | A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title_full_unstemmed | A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title_short | A Whole-Genome Sequencing Study Implicates GRAMD1B in Multiple Sclerosis Susceptibility |
title_sort | whole-genome sequencing study implicates gramd1b in multiple sclerosis susceptibility |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9777893/ https://www.ncbi.nlm.nih.gov/pubmed/36553660 http://dx.doi.org/10.3390/genes13122392 |
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