Cargando…

Screening Discriminating SNPs for Chinese Indigenous Pig Breeds Identification Using a Random Forests Algorithm

Chinese indigenous pig breeds have unique genetic characteristics and a rich diversity; however, effective breed identification methods have not yet been well established. In this study, a genotype file of 62,822 single-nucleotide polymorphisms (SNPs), which were obtained from 1059 individuals of 18...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gao, Jun, Sun, Lingwei, Zhang, Shushan, Xu, Jiehuan, He, Mengqian, Zhang, Defu, Wu, Caifeng, Dai, Jianjun
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778029/ https://www.ncbi.nlm.nih.gov/pubmed/36553474 http://dx.doi.org/10.3390/genes13122207

Ejemplares similares

Effect of Poria cocos Mushroom Polysaccharides (PCPs) on the Quality and DNA Methylation of Cryopreserved Shanghai White Pig Spermatozoa
por: Zhou, Jinyong, et al.
Publicado: (2023)

Resveratrol Protects against Zearalenone-Induced Mitochondrial Defects during Porcine Oocyte Maturation via PINK1/Parkin-Mediated Mitophagy
por: Xu, Jiehuan, et al.
Publicado: (2022)

Does Antioxidant Mitoquinone (MitoQ) Ameliorate Oxidative Stress in Frozen–Thawed Rooster Sperm?
por: Sun, Lingwei, et al.
Publicado: (2022)

Beneficial Influence of Soybean Lecithin Nanoparticles on Rooster Frozen–Thawed Semen Quality and Fertility
por: Sun, Lingwei, et al.
Publicado: (2021)

Comparative Cytotoxic Effects and Possible Mechanisms of Deoxynivalenol, Zearalenone and T-2 Toxin Exposure to Porcine Leydig Cells In Vitro
por: Sun, Lingwei, et al.
Publicado: (2022)

Genetic variation and relationships of eighteen Chinese indigenous pig breeds
por: Yang, Shu-Lin, et al.
Publicado: (2003)

Genomic mating as sustainable breeding for Chinese indigenous Ningxiang pigs
por: He, Jun, et al.
Publicado: (2020)

Conservation Priorities Analysis of Chinese Indigenous Pig Breeds in the Taihu Lake Region
por: Zhao, Qing-bo, et al.
Publicado: (2021)

Genetic Diversity and Signatures of Selection in 15 Chinese Indigenous Dog Breeds Revealed by Genome-Wide SNPs
por: Yang, Qianyong, et al.
Publicado: (2019)

Genetic variations of the porcine PRKAG3 gene in Chinese indigenous pig breeds
por: Huang, Lu-Sheng, et al.
Publicado: (2004)

Genetic diversity and breed-informative SNPs identification in domestic pig populations using coding SNPs
por: Hayah, Ichrak, et al.
Publicado: (2023)

A genome-wide scan for signatures of selection in Chinese indigenous and commercial pig breeds
por: Yang, Songbai, et al.
Publicado: (2014)

Genetic Diversities and Differentially Selected Regions Between Shandong Indigenous Pig Breeds and Western Pig Breeds
por: Qin, Ming, et al.
Publicado: (2020)

A Comprehensive Genomic Analysis of Chinese Indigenous Ningxiang Pigs: Genomic Breed Compositions, Runs of Homozygosity, and Beyond
por: Yin, Shishu, et al.
Publicado: (2023)

Integrative analysis of transcriptomics and proteomics of skeletal muscles of the Chinese indigenous Shaziling pig compared with the Yorkshire breed
por: Yang, Hu, et al.
Publicado: (2016)

Genome-Wide Analysis Reveals Human-Mediated Introgression from Western Pigs to Indigenous Chinese Breeds
por: Wang, Jue, et al.
Publicado: (2020)

Identifying the unique characteristics of the Chinese indigenous pig breeds in the Yangtze River Delta region for precise conservation
por: Zhao, Qing-bo, et al.
Publicado: (2021)

Biological mechanisms discriminating growth rate and adult body weight phenotypes in two Chinese indigenous chicken breeds
por: Dou, Tengfei, et al.
Publicado: (2017)

Genome-Wide SNPs and InDels Characteristics of Three Chinese Cattle Breeds
por: Zhang, Fengwei, et al.
Publicado: (2019)

Genetic diversity and population structure of six Chinese indigenous pig breeds in the Taihu Lake region revealed by sequencing data
por: Wang, Z., et al.
Publicado: (2015)

Genome-wide analysis of circRNA regulation during spleen development of Chinese indigenous breed Meishan pigs
por: Wang, Yifu, et al.
Publicado: (2023)

Genomic selection analysis of morphological and adaptation traits in Chinese indigenous dog breeds
por: Li, Yangfeng, et al.
Publicado: (2023)

Analysis of Genome-Wide Copy Number Variations in Chinese Indigenous and Western Pig Breeds by 60 K SNP Genotyping Arrays
por: Wang, Yanan, et al.
Publicado: (2014)

Theoretical Evaluation of Multi-Breed Genomic Prediction in Chinese Indigenous Cattle
por: Xu, Lei, et al.
Publicado: (2019)

Traditional Chinese Medicine Constitution Discrimination Model Based on Metabolomics and Random Forest Decision Tree Algorithm
por: Huang, Chaodong, et al.
Publicado: (2022)

Distinct traces of mixed ancestry in western commercial pig genomes following gene flow from Chinese indigenous breeds
por: Peng, Yebo, et al.
Publicado: (2023)

Detection of genomic structural variations in Guizhou indigenous pigs and the comparison with other breeds
por: Liu, Chang, et al.
Publicado: (2018)

Conservation Genomic Analysis of the Croatian Indigenous Black Slavonian and Turopolje Pig Breeds
por: Lukić, Boris, et al.
Publicado: (2020)

Widespread introgression in Chinese indigenous chicken breeds from commercial broiler
por: Zhang, Chunyuan, et al.
Publicado: (2019)

Admixture and breed traceability in European indigenous pig breeds and wild boar using genome-wide SNP data
por: Dadousis, Christos, et al.
Publicado: (2022)

Transcriptomics Analysis on Excellent Meat Quality Traits of Skeletal Muscles of the Chinese Indigenous Min Pig Compared with the Large White Breed
por: Liu, Yingzi, et al.
Publicado: (2017)

Genetic variation and relationships in the mitochondrial DNA D-loop region of Qinghai indigenous and commercial pig breeds
por: Zhang, Junxia, et al.
Publicado: (2018)

The application of sparse estimation of covariance matrix to quadratic discriminant analysis
por: Sun, Jiehuan, et al.
Publicado: (2015)

The fine‐scale genetic structure and selection signals of Chinese indigenous pigs
por: Huang, Min, et al.
Publicado: (2019)

Breed Differences in Pig Liver Esterase (PLE) between Tongcheng (Chinese Local Breed) and Large White Pigs
por: Xiao, Qiling, et al.
Publicado: (2018)

Genome-wide analysis reveals population structure and selection in Chinese indigenous sheep breeds
por: Wei, Caihong, et al.
Publicado: (2015)

Discovering candidate SNPs for resilience breeding of red clover
por: Osterman, Johanna, et al.
Publicado: (2022)

Genetic characterization of indigenous goat breeds in Romania and Hungary with a special focus on genetic resistance to mastitis and gastrointestinal parasitism based on 40 SNPs
por: Ilie, Daniela Elena, et al.
Publicado: (2018)

Analysis of Conservation Priorities and Runs of Homozygosity Patterns for Chinese Indigenous Chicken Breeds
por: Gao, Chaoqun, et al.
Publicado: (2023)

Characteristics and potential biomarkers of flavor compounds in four Chinese indigenous chicken breeds
por: Xiong, Xinwei, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_2aa4uts6rq4b070js0l5a63n7t