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Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)

As a relict plant, Taxus is used in a variety of medicinal ingredients, for instance to treat a variety of cancers. Taxus plants are difficult to distinguish from one another due to their similar morphology; indeed, some species of Taxus cytogenetic data still are unclear. Oligo-FISH can rapidly and...

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Autores principales: He, Zhoujian, Luo, Xiaomei, Lei, Yuting, Zhang, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778077/
https://www.ncbi.nlm.nih.gov/pubmed/36553477
http://dx.doi.org/10.3390/genes13122209
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author He, Zhoujian
Luo, Xiaomei
Lei, Yuting
Zhang, Wei
author_facet He, Zhoujian
Luo, Xiaomei
Lei, Yuting
Zhang, Wei
author_sort He, Zhoujian
collection PubMed
description As a relict plant, Taxus is used in a variety of medicinal ingredients, for instance to treat a variety of cancers. Taxus plants are difficult to distinguish from one another due to their similar morphology; indeed, some species of Taxus cytogenetic data still are unclear. Oligo-FISH can rapidly and efficiently provide insight into the genetic composition and karyotype. This is important for understanding the organization and evolution of chromosomes in Taxus species. We analysed five Taxus species using two oligonucleotide probes. (AG(3)T(3))(3) signals were distributed at the chromosome ends and the centromere of five species of Taxus. The 5S rDNA signal was displayed on two chromosomes of five species of Taxus. In addition to Taxus wallichiana var. mairei, 5S rDNA signals were found proximal in the remaining four species, which signals a difference in its location. The karyotype formula of Taxus wallichiana was 2n = 2x = 24m, its karyotype asymmetry index was 55.56%, and its arm ratio was 3.0087. Taxus × media’s karyotype formula was 2n = 2x = 24m, its karyotype asymmetry index was 55.09%, and its arm ratio was 3.4198. The karyotype formula of Taxus yunnanensis was 2n = 2x = 24m, its karyotype asymmetry index was 55.56%, and its arm ratio was 2.6402. The karyotype formula of Taxus cuspidate was 2n = 2x = 24m, its karyotype asymmetry index was 54.67%, its arm ratio was 3.0135, and two chromosomes exhibited the 5S rDNA signal. The karyotype formula of T. wallichiana var. mairei was 2n= 2x = 22m + 2sm, its karyotype asymmetry index was 54.33%, and its arm ratio was 2.8716. Our results provide the karyotype analysis and physical genetic map of five species of Taxus, which contributes to providing molecular cytogenetics data for Taxus.
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spelling pubmed-97780772022-12-23 Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3) He, Zhoujian Luo, Xiaomei Lei, Yuting Zhang, Wei Genes (Basel) Article As a relict plant, Taxus is used in a variety of medicinal ingredients, for instance to treat a variety of cancers. Taxus plants are difficult to distinguish from one another due to their similar morphology; indeed, some species of Taxus cytogenetic data still are unclear. Oligo-FISH can rapidly and efficiently provide insight into the genetic composition and karyotype. This is important for understanding the organization and evolution of chromosomes in Taxus species. We analysed five Taxus species using two oligonucleotide probes. (AG(3)T(3))(3) signals were distributed at the chromosome ends and the centromere of five species of Taxus. The 5S rDNA signal was displayed on two chromosomes of five species of Taxus. In addition to Taxus wallichiana var. mairei, 5S rDNA signals were found proximal in the remaining four species, which signals a difference in its location. The karyotype formula of Taxus wallichiana was 2n = 2x = 24m, its karyotype asymmetry index was 55.56%, and its arm ratio was 3.0087. Taxus × media’s karyotype formula was 2n = 2x = 24m, its karyotype asymmetry index was 55.09%, and its arm ratio was 3.4198. The karyotype formula of Taxus yunnanensis was 2n = 2x = 24m, its karyotype asymmetry index was 55.56%, and its arm ratio was 2.6402. The karyotype formula of Taxus cuspidate was 2n = 2x = 24m, its karyotype asymmetry index was 54.67%, its arm ratio was 3.0135, and two chromosomes exhibited the 5S rDNA signal. The karyotype formula of T. wallichiana var. mairei was 2n= 2x = 22m + 2sm, its karyotype asymmetry index was 54.33%, and its arm ratio was 2.8716. Our results provide the karyotype analysis and physical genetic map of five species of Taxus, which contributes to providing molecular cytogenetics data for Taxus. MDPI 2022-11-25 /pmc/articles/PMC9778077/ /pubmed/36553477 http://dx.doi.org/10.3390/genes13122209 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
He, Zhoujian
Luo, Xiaomei
Lei, Yuting
Zhang, Wei
Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title_full Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title_fullStr Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title_full_unstemmed Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title_short Five Species of Taxus Karyotype Based on Oligo-FISH for 5S rDNA and (AG(3)T(3))(3)
title_sort five species of taxus karyotype based on oligo-fish for 5s rdna and (ag(3)t(3))(3)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778077/
https://www.ncbi.nlm.nih.gov/pubmed/36553477
http://dx.doi.org/10.3390/genes13122209
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