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Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis

Identification of new, effective disease resistance genes is a very important aspect of plant breeding. Also important is the precise location of individual loci and tagging them with DNA markers for marker assisted selection. The aim of the present study was identification of the molecular markers...

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Autores principales: Ociepa, Tomasz, Okoń, Sylwia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778159/
https://www.ncbi.nlm.nih.gov/pubmed/36553676
http://dx.doi.org/10.3390/genes13122409
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author Ociepa, Tomasz
Okoń, Sylwia
author_facet Ociepa, Tomasz
Okoń, Sylwia
author_sort Ociepa, Tomasz
collection PubMed
description Identification of new, effective disease resistance genes is a very important aspect of plant breeding. Also important is the precise location of individual loci and tagging them with DNA markers for marker assisted selection. The aim of the present study was identification of the molecular markers linked with Pm12, a new effective resistance gene to powdery mildew, and their location in the oat genome. The analysis was performed on 167 F(2) individuals from a hybrid of Fuchs × CN67383, with the status of the locus in each individual verified by progeny test in F(3). Segregation ratios confirmed the monogenic nature of resistance. Making use of the sequence data of DNA markers and the oat OT3098 v2 genome reference assembly, Pm12 is located on chromosome 7C. A comparison was also made with the reference consensus map, to which there are more reports of mapped genes to date. The mapping results suggest that Pm12 is located in the interval 103.8–111.7 cM on this map. No powdery mildew resistance locus has been identified in this region so far, suggesting that Avena sterilis CN67383 carries a novel locus offering effective resistance in oat breeding. The information included in the oat genome annotation allowed for the identification of candidate genes in the close region of the marker cluster for Pm12. This information may provide an interesting source of further analysis of the pathways of various genes in response to the stress of powdery mildew infection.
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spelling pubmed-97781592022-12-23 Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis Ociepa, Tomasz Okoń, Sylwia Genes (Basel) Article Identification of new, effective disease resistance genes is a very important aspect of plant breeding. Also important is the precise location of individual loci and tagging them with DNA markers for marker assisted selection. The aim of the present study was identification of the molecular markers linked with Pm12, a new effective resistance gene to powdery mildew, and their location in the oat genome. The analysis was performed on 167 F(2) individuals from a hybrid of Fuchs × CN67383, with the status of the locus in each individual verified by progeny test in F(3). Segregation ratios confirmed the monogenic nature of resistance. Making use of the sequence data of DNA markers and the oat OT3098 v2 genome reference assembly, Pm12 is located on chromosome 7C. A comparison was also made with the reference consensus map, to which there are more reports of mapped genes to date. The mapping results suggest that Pm12 is located in the interval 103.8–111.7 cM on this map. No powdery mildew resistance locus has been identified in this region so far, suggesting that Avena sterilis CN67383 carries a novel locus offering effective resistance in oat breeding. The information included in the oat genome annotation allowed for the identification of candidate genes in the close region of the marker cluster for Pm12. This information may provide an interesting source of further analysis of the pathways of various genes in response to the stress of powdery mildew infection. MDPI 2022-12-19 /pmc/articles/PMC9778159/ /pubmed/36553676 http://dx.doi.org/10.3390/genes13122409 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ociepa, Tomasz
Okoń, Sylwia
Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title_full Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title_fullStr Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title_full_unstemmed Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title_short Chromosomal Location of Pm12—A Novel Powdery Mildew Resistance Gene from Avena sterilis
title_sort chromosomal location of pm12—a novel powdery mildew resistance gene from avena sterilis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778159/
https://www.ncbi.nlm.nih.gov/pubmed/36553676
http://dx.doi.org/10.3390/genes13122409
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