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Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare)
Kinesin, as a member of the molecular motor protein superfamily, plays an essential function in various plants’ developmental processes. Especially at the early stages of plant growth, including influences on plants’ growth rate, yield, and quality. In this study, we did a genome-wide identification...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778244/ https://www.ncbi.nlm.nih.gov/pubmed/36553643 http://dx.doi.org/10.3390/genes13122376 |
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author | Ye, Zhaoshun Yuan, Zhen Xu, Huan Pan, Leiwen Chen, Jingsi Gatera, Anicet Uzair, Muhammad Xu, Dawei |
author_facet | Ye, Zhaoshun Yuan, Zhen Xu, Huan Pan, Leiwen Chen, Jingsi Gatera, Anicet Uzair, Muhammad Xu, Dawei |
author_sort | Ye, Zhaoshun |
collection | PubMed |
description | Kinesin, as a member of the molecular motor protein superfamily, plays an essential function in various plants’ developmental processes. Especially at the early stages of plant growth, including influences on plants’ growth rate, yield, and quality. In this study, we did a genome-wide identification and expression profile analysis of the kinesin family in barley. Forty-two HvKINs were identified and screened from the barley genome, and a generated phylogenetic tree was used to compare the evolutionary relationships between Rice and Arabidopsis. The protein structure prediction, physicochemical properties, and bioinformatics of the HvKINs were also dissected. Our results reveal the important regulatory roles of HvKIN genes in barley growth. We found many cis- elements related to GA3 and ABA in homeopathic elements of the HvKIN gene and verified them by QRT-PCR, indicating their potential role in the barley kinesin family. The current study revealed the biological functions of barley kinesin genes in barley and will aid in further investigating the kinesin in other plant species. |
format | Online Article Text |
id | pubmed-9778244 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-97782442022-12-23 Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) Ye, Zhaoshun Yuan, Zhen Xu, Huan Pan, Leiwen Chen, Jingsi Gatera, Anicet Uzair, Muhammad Xu, Dawei Genes (Basel) Article Kinesin, as a member of the molecular motor protein superfamily, plays an essential function in various plants’ developmental processes. Especially at the early stages of plant growth, including influences on plants’ growth rate, yield, and quality. In this study, we did a genome-wide identification and expression profile analysis of the kinesin family in barley. Forty-two HvKINs were identified and screened from the barley genome, and a generated phylogenetic tree was used to compare the evolutionary relationships between Rice and Arabidopsis. The protein structure prediction, physicochemical properties, and bioinformatics of the HvKINs were also dissected. Our results reveal the important regulatory roles of HvKIN genes in barley growth. We found many cis- elements related to GA3 and ABA in homeopathic elements of the HvKIN gene and verified them by QRT-PCR, indicating their potential role in the barley kinesin family. The current study revealed the biological functions of barley kinesin genes in barley and will aid in further investigating the kinesin in other plant species. MDPI 2022-12-16 /pmc/articles/PMC9778244/ /pubmed/36553643 http://dx.doi.org/10.3390/genes13122376 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ye, Zhaoshun Yuan, Zhen Xu, Huan Pan, Leiwen Chen, Jingsi Gatera, Anicet Uzair, Muhammad Xu, Dawei Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title | Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title_full | Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title_fullStr | Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title_full_unstemmed | Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title_short | Genome-Wide Identification and Expression Analysis of Kinesin Family in Barley (Hordeum vulgare) |
title_sort | genome-wide identification and expression analysis of kinesin family in barley (hordeum vulgare) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9778244/ https://www.ncbi.nlm.nih.gov/pubmed/36553643 http://dx.doi.org/10.3390/genes13122376 |
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