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Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia

Molecular identification of species is especially important where traditional taxonomic methods fail. The genus Calypogeia belongs to one of the tricky taxons. The simple morphology of these species and a tendency towards environmental plasticity make them complicated in identification. The finding...

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Detalles Bibliográficos
Autores principales: Ślipiko, Monika, Myszczyński, Kamil, Buczkowska, Katarzyna, Bączkiewicz, Alina, Sawicki, Jakub
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9779425/
https://www.ncbi.nlm.nih.gov/pubmed/36555212
http://dx.doi.org/10.3390/ijms232415570
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author Ślipiko, Monika
Myszczyński, Kamil
Buczkowska, Katarzyna
Bączkiewicz, Alina
Sawicki, Jakub
author_facet Ślipiko, Monika
Myszczyński, Kamil
Buczkowska, Katarzyna
Bączkiewicz, Alina
Sawicki, Jakub
author_sort Ślipiko, Monika
collection PubMed
description Molecular identification of species is especially important where traditional taxonomic methods fail. The genus Calypogeia belongs to one of the tricky taxons. The simple morphology of these species and a tendency towards environmental plasticity make them complicated in identification. The finding of the universal single-locus DNA barcode in plants seems to be ‘the Holy Grail’; therefore, researchers are increasingly looking for multiloci DNA barcodes or super-barcoding. Since the mitochondrial genome has low sequence variation in plants, species delimitation is usually based on the chloroplast genome. Unexpectedly, our research shows that super-mitobarcoding can also work! However, our outcomes showed that a single method of molecular species delimitation should be avoided. Moreover, it is recommended to interpret the results of molecular species delimitation alongside other types of evidence, such as ecology, population genetics or comparative morphology. Here, we also presented genetic data supporting the view that C. suecica is not a homogeneous species.
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spelling pubmed-97794252022-12-23 Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia Ślipiko, Monika Myszczyński, Kamil Buczkowska, Katarzyna Bączkiewicz, Alina Sawicki, Jakub Int J Mol Sci Article Molecular identification of species is especially important where traditional taxonomic methods fail. The genus Calypogeia belongs to one of the tricky taxons. The simple morphology of these species and a tendency towards environmental plasticity make them complicated in identification. The finding of the universal single-locus DNA barcode in plants seems to be ‘the Holy Grail’; therefore, researchers are increasingly looking for multiloci DNA barcodes or super-barcoding. Since the mitochondrial genome has low sequence variation in plants, species delimitation is usually based on the chloroplast genome. Unexpectedly, our research shows that super-mitobarcoding can also work! However, our outcomes showed that a single method of molecular species delimitation should be avoided. Moreover, it is recommended to interpret the results of molecular species delimitation alongside other types of evidence, such as ecology, population genetics or comparative morphology. Here, we also presented genetic data supporting the view that C. suecica is not a homogeneous species. MDPI 2022-12-08 /pmc/articles/PMC9779425/ /pubmed/36555212 http://dx.doi.org/10.3390/ijms232415570 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ślipiko, Monika
Myszczyński, Kamil
Buczkowska, Katarzyna
Bączkiewicz, Alina
Sawicki, Jakub
Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title_full Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title_fullStr Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title_full_unstemmed Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title_short Super-Mitobarcoding in Plant Species Identification? It Can Work! The Case of Leafy Liverworts Belonging to the Genus Calypogeia
title_sort super-mitobarcoding in plant species identification? it can work! the case of leafy liverworts belonging to the genus calypogeia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9779425/
https://www.ncbi.nlm.nih.gov/pubmed/36555212
http://dx.doi.org/10.3390/ijms232415570
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