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Confounders mediate AI prediction of demographics in medical imaging

Deep learning has been shown to accurately assess “hidden” phenotypes from medical imaging beyond traditional clinician interpretation. Using large echocardiography datasets from two healthcare systems, we test whether it is possible to predict age, race, and sex from cardiac ultrasound images using...

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Autores principales: Duffy, Grant, Clarke, Shoa L., Christensen, Matthew, He, Bryan, Yuan, Neal, Cheng, Susan, Ouyang, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9780355/
https://www.ncbi.nlm.nih.gov/pubmed/36550271
http://dx.doi.org/10.1038/s41746-022-00720-8
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author Duffy, Grant
Clarke, Shoa L.
Christensen, Matthew
He, Bryan
Yuan, Neal
Cheng, Susan
Ouyang, David
author_facet Duffy, Grant
Clarke, Shoa L.
Christensen, Matthew
He, Bryan
Yuan, Neal
Cheng, Susan
Ouyang, David
author_sort Duffy, Grant
collection PubMed
description Deep learning has been shown to accurately assess “hidden” phenotypes from medical imaging beyond traditional clinician interpretation. Using large echocardiography datasets from two healthcare systems, we test whether it is possible to predict age, race, and sex from cardiac ultrasound images using deep learning algorithms and assess the impact of varying confounding variables. Using a total of 433,469 videos from Cedars-Sinai Medical Center and 99,909 videos from Stanford Medical Center, we trained video-based convolutional neural networks to predict age, sex, and race. We found that deep learning models were able to identify age and sex, while unable to reliably predict race. Without considering confounding differences between categories, the AI model predicted sex with an AUC of 0.85 (95% CI 0.84–0.86), age with a mean absolute error of 9.12 years (95% CI 9.00–9.25), and race with AUCs ranging from 0.63 to 0.71. When predicting race, we show that tuning the proportion of confounding variables (age or sex) in the training data significantly impacts model AUC (ranging from 0.53 to 0.85), while sex and age prediction was not particularly impacted by adjusting race proportion in the training dataset AUC of 0.81–0.83 and 0.80–0.84, respectively. This suggests significant proportion of AI’s performance on predicting race could come from confounding features being detected. Further work remains to identify the particular imaging features that associate with demographic information and to better understand the risks of demographic identification in medical AI as it pertains to potentially perpetuating bias and disparities.
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spelling pubmed-97803552022-12-24 Confounders mediate AI prediction of demographics in medical imaging Duffy, Grant Clarke, Shoa L. Christensen, Matthew He, Bryan Yuan, Neal Cheng, Susan Ouyang, David NPJ Digit Med Article Deep learning has been shown to accurately assess “hidden” phenotypes from medical imaging beyond traditional clinician interpretation. Using large echocardiography datasets from two healthcare systems, we test whether it is possible to predict age, race, and sex from cardiac ultrasound images using deep learning algorithms and assess the impact of varying confounding variables. Using a total of 433,469 videos from Cedars-Sinai Medical Center and 99,909 videos from Stanford Medical Center, we trained video-based convolutional neural networks to predict age, sex, and race. We found that deep learning models were able to identify age and sex, while unable to reliably predict race. Without considering confounding differences between categories, the AI model predicted sex with an AUC of 0.85 (95% CI 0.84–0.86), age with a mean absolute error of 9.12 years (95% CI 9.00–9.25), and race with AUCs ranging from 0.63 to 0.71. When predicting race, we show that tuning the proportion of confounding variables (age or sex) in the training data significantly impacts model AUC (ranging from 0.53 to 0.85), while sex and age prediction was not particularly impacted by adjusting race proportion in the training dataset AUC of 0.81–0.83 and 0.80–0.84, respectively. This suggests significant proportion of AI’s performance on predicting race could come from confounding features being detected. Further work remains to identify the particular imaging features that associate with demographic information and to better understand the risks of demographic identification in medical AI as it pertains to potentially perpetuating bias and disparities. Nature Publishing Group UK 2022-12-22 /pmc/articles/PMC9780355/ /pubmed/36550271 http://dx.doi.org/10.1038/s41746-022-00720-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Duffy, Grant
Clarke, Shoa L.
Christensen, Matthew
He, Bryan
Yuan, Neal
Cheng, Susan
Ouyang, David
Confounders mediate AI prediction of demographics in medical imaging
title Confounders mediate AI prediction of demographics in medical imaging
title_full Confounders mediate AI prediction of demographics in medical imaging
title_fullStr Confounders mediate AI prediction of demographics in medical imaging
title_full_unstemmed Confounders mediate AI prediction of demographics in medical imaging
title_short Confounders mediate AI prediction of demographics in medical imaging
title_sort confounders mediate ai prediction of demographics in medical imaging
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9780355/
https://www.ncbi.nlm.nih.gov/pubmed/36550271
http://dx.doi.org/10.1038/s41746-022-00720-8
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