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Retinal OCTA Image Segmentation Based on Global Contrastive Learning

The automatic segmentation of retinal vessels is of great significance for the analysis and diagnosis of retinal related diseases. However, the imbalanced data in retinal vascular images remain a great challenge. Current image segmentation methods based on deep learning almost always focus on local...

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Autores principales: Ma, Ziping, Feng, Dongxiu, Wang, Jingyu, Ma, Hu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9781437/
https://www.ncbi.nlm.nih.gov/pubmed/36560216
http://dx.doi.org/10.3390/s22249847
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author Ma, Ziping
Feng, Dongxiu
Wang, Jingyu
Ma, Hu
author_facet Ma, Ziping
Feng, Dongxiu
Wang, Jingyu
Ma, Hu
author_sort Ma, Ziping
collection PubMed
description The automatic segmentation of retinal vessels is of great significance for the analysis and diagnosis of retinal related diseases. However, the imbalanced data in retinal vascular images remain a great challenge. Current image segmentation methods based on deep learning almost always focus on local information in a single image while ignoring the global information of the entire dataset. To solve the problem of data imbalance in optical coherence tomography angiography (OCTA) datasets, this paper proposes a medical image segmentation method (contrastive OCTA segmentation net, COSNet) based on global contrastive learning. First, the feature extraction module extracts the features of OCTA image input and maps them to the segment head and the multilayer perceptron (MLP) head, respectively. Second, a contrastive learning module saves the pixel queue and pixel embedding of each category in the feature map into the memory bank, generates sample pairs through a mixed sampling strategy to construct a new contrastive loss function, and forces the network to learn local information and global information simultaneously. Finally, the segmented image is fine tuned to restore positional information of deep vessels. The experimental results show the proposed method can improve the accuracy (ACC), the area under the curve (AUC), and other evaluation indexes of image segmentation compared with the existing methods. This method could accomplish segmentation tasks in imbalanced data and extend to other segmentation tasks.
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spelling pubmed-97814372022-12-24 Retinal OCTA Image Segmentation Based on Global Contrastive Learning Ma, Ziping Feng, Dongxiu Wang, Jingyu Ma, Hu Sensors (Basel) Article The automatic segmentation of retinal vessels is of great significance for the analysis and diagnosis of retinal related diseases. However, the imbalanced data in retinal vascular images remain a great challenge. Current image segmentation methods based on deep learning almost always focus on local information in a single image while ignoring the global information of the entire dataset. To solve the problem of data imbalance in optical coherence tomography angiography (OCTA) datasets, this paper proposes a medical image segmentation method (contrastive OCTA segmentation net, COSNet) based on global contrastive learning. First, the feature extraction module extracts the features of OCTA image input and maps them to the segment head and the multilayer perceptron (MLP) head, respectively. Second, a contrastive learning module saves the pixel queue and pixel embedding of each category in the feature map into the memory bank, generates sample pairs through a mixed sampling strategy to construct a new contrastive loss function, and forces the network to learn local information and global information simultaneously. Finally, the segmented image is fine tuned to restore positional information of deep vessels. The experimental results show the proposed method can improve the accuracy (ACC), the area under the curve (AUC), and other evaluation indexes of image segmentation compared with the existing methods. This method could accomplish segmentation tasks in imbalanced data and extend to other segmentation tasks. MDPI 2022-12-14 /pmc/articles/PMC9781437/ /pubmed/36560216 http://dx.doi.org/10.3390/s22249847 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ma, Ziping
Feng, Dongxiu
Wang, Jingyu
Ma, Hu
Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title_full Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title_fullStr Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title_full_unstemmed Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title_short Retinal OCTA Image Segmentation Based on Global Contrastive Learning
title_sort retinal octa image segmentation based on global contrastive learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9781437/
https://www.ncbi.nlm.nih.gov/pubmed/36560216
http://dx.doi.org/10.3390/s22249847
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AT fengdongxiu retinaloctaimagesegmentationbasedonglobalcontrastivelearning
AT wangjingyu retinaloctaimagesegmentationbasedonglobalcontrastivelearning
AT mahu retinaloctaimagesegmentationbasedonglobalcontrastivelearning