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Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea

Since the first confirmation of African swine fever (ASF) in domestic pig farms in South Korea in September 2019, ASF continues to expand and most notifications have been reported in wild boar populations. In this study, we first performed a spatio-temporal cluster analysis to understand ASF spread...

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Autores principales: Ito, Satoshi, Bosch, Jaime, Jeong, Hyunkyu, Aguilar-Vega, Cecilia, Park, Jonghoon, Martínez-Avilés, Marta, Sánchez-Vizcaíno, Jose Manuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9782897/
https://www.ncbi.nlm.nih.gov/pubmed/36560783
http://dx.doi.org/10.3390/v14122779
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author Ito, Satoshi
Bosch, Jaime
Jeong, Hyunkyu
Aguilar-Vega, Cecilia
Park, Jonghoon
Martínez-Avilés, Marta
Sánchez-Vizcaíno, Jose Manuel
author_facet Ito, Satoshi
Bosch, Jaime
Jeong, Hyunkyu
Aguilar-Vega, Cecilia
Park, Jonghoon
Martínez-Avilés, Marta
Sánchez-Vizcaíno, Jose Manuel
author_sort Ito, Satoshi
collection PubMed
description Since the first confirmation of African swine fever (ASF) in domestic pig farms in South Korea in September 2019, ASF continues to expand and most notifications have been reported in wild boar populations. In this study, we first performed a spatio-temporal cluster analysis to understand ASF spread in wild boar. Secondly, generalized linear logistic regression (GLLR) model analysis was performed to identify environmental factors contributing to cluster formation. In the meantime, the basic reproduction number (R(0)) for each cluster was estimated to understand the growth of the epidemic. The cluster analysis resulted in the detection of 17 spatio-temporal clusters. The GLLR model analysis identified factors influencing cluster formation and indicated the possibility of estimating ASF epidemic areas based on environmental conditions. In a scenario only considering direct transmission among wild boar, R(0) ranged from 1.01 to 1.5 with an average of 1.10, while, in another scenario including indirect transmission via an infected carcass, R(0) ranged from 1.03 to 4.38 with an average of 1.56. We identified factors influencing ASF expansion based on spatio-temporal clusters. The results obtained would be useful for selecting priority areas for ASF control and would greatly assist in identifying efficient vaccination areas in the future.
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spelling pubmed-97828972022-12-24 Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea Ito, Satoshi Bosch, Jaime Jeong, Hyunkyu Aguilar-Vega, Cecilia Park, Jonghoon Martínez-Avilés, Marta Sánchez-Vizcaíno, Jose Manuel Viruses Article Since the first confirmation of African swine fever (ASF) in domestic pig farms in South Korea in September 2019, ASF continues to expand and most notifications have been reported in wild boar populations. In this study, we first performed a spatio-temporal cluster analysis to understand ASF spread in wild boar. Secondly, generalized linear logistic regression (GLLR) model analysis was performed to identify environmental factors contributing to cluster formation. In the meantime, the basic reproduction number (R(0)) for each cluster was estimated to understand the growth of the epidemic. The cluster analysis resulted in the detection of 17 spatio-temporal clusters. The GLLR model analysis identified factors influencing cluster formation and indicated the possibility of estimating ASF epidemic areas based on environmental conditions. In a scenario only considering direct transmission among wild boar, R(0) ranged from 1.01 to 1.5 with an average of 1.10, while, in another scenario including indirect transmission via an infected carcass, R(0) ranged from 1.03 to 4.38 with an average of 1.56. We identified factors influencing ASF expansion based on spatio-temporal clusters. The results obtained would be useful for selecting priority areas for ASF control and would greatly assist in identifying efficient vaccination areas in the future. MDPI 2022-12-13 /pmc/articles/PMC9782897/ /pubmed/36560783 http://dx.doi.org/10.3390/v14122779 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ito, Satoshi
Bosch, Jaime
Jeong, Hyunkyu
Aguilar-Vega, Cecilia
Park, Jonghoon
Martínez-Avilés, Marta
Sánchez-Vizcaíno, Jose Manuel
Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title_full Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title_fullStr Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title_full_unstemmed Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title_short Spatio-Temporal Epidemiology of the Spread of African Swine Fever in Wild Boar and the Role of Environmental Factors in South Korea
title_sort spatio-temporal epidemiology of the spread of african swine fever in wild boar and the role of environmental factors in south korea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9782897/
https://www.ncbi.nlm.nih.gov/pubmed/36560783
http://dx.doi.org/10.3390/v14122779
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