Cargando…
Critical Assessment of Short-Read Assemblers for the Metagenomic Identification of Foodborne and Waterborne Pathogens Using Simulated Bacterial Communities
Metagenomics offers the highest level of strain discrimination of bacterial pathogens from complex food and water microbiota. With the rapid evolvement of assembly algorithms, defining an optimal assembler based on the performance in the metagenomic identification of foodborne and waterborne pathoge...
Autores principales: | Chen, Zhao, Meng, Jianghong |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9784204/ https://www.ncbi.nlm.nih.gov/pubmed/36557669 http://dx.doi.org/10.3390/microorganisms10122416 |
Ejemplares similares
-
Evaluation of short read metagenomic assembly
por: Charuvaka, Anveshi, et al.
Publicado: (2011) -
Hepatitis E Virus: Foodborne, Waterborne and Zoonotic Transmission
por: Yugo, Danielle M., et al.
Publicado: (2013) -
New approaches for metagenome assembly with short reads
por: Ayling, Martin, et al.
Publicado: (2019) -
Benchmarking Long-Read Assemblers for Genomic Analyses of Bacterial Pathogens Using Oxford Nanopore Sequencing
por: Chen, Zhao, et al.
Publicado: (2020) -
Evaluating the Fidelity of De Novo Short Read Metagenomic Assembly Using Simulated Data
por: Pignatelli, Miguel, et al.
Publicado: (2011)