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An automated artifact detection and rejection system for body surface gastric mapping

BACKGROUND: Body surface gastric mapping (BSGM) is a new clinical tool for gastric motility diagnostics, providing high‐resolution data on gastric myoelectrical activity. Artifact contamination was a key challenge to reliable test interpretation in traditional electrogastrography. This study aimed t...

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Autores principales: Calder, Stefan, Schamberg, Gabriel, Varghese, Chris, Waite, Stephen, Sebaratnam, Gabrielle, Woodhead, Jonathan S. T., Du, Peng, Andrews, Christopher N., O'Grady, Greg, Gharibans, Armen A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9786272/
https://www.ncbi.nlm.nih.gov/pubmed/35699347
http://dx.doi.org/10.1111/nmo.14421
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author Calder, Stefan
Schamberg, Gabriel
Varghese, Chris
Waite, Stephen
Sebaratnam, Gabrielle
Woodhead, Jonathan S. T.
Du, Peng
Andrews, Christopher N.
O'Grady, Greg
Gharibans, Armen A.
author_facet Calder, Stefan
Schamberg, Gabriel
Varghese, Chris
Waite, Stephen
Sebaratnam, Gabrielle
Woodhead, Jonathan S. T.
Du, Peng
Andrews, Christopher N.
O'Grady, Greg
Gharibans, Armen A.
author_sort Calder, Stefan
collection PubMed
description BACKGROUND: Body surface gastric mapping (BSGM) is a new clinical tool for gastric motility diagnostics, providing high‐resolution data on gastric myoelectrical activity. Artifact contamination was a key challenge to reliable test interpretation in traditional electrogastrography. This study aimed to introduce and validate an automated artifact detection and rejection system for clinical BSGM applications. METHODS: Ten patients with chronic gastric symptoms generated a variety of artifacts according to a standardized protocol (176 recordings) using a commercial BSGM system (Alimetry, New Zealand). An automated artifact detection and rejection algorithm was developed, and its performance was compared with a reference standard comprising consensus labeling by 3 analysis experts, followed by comparison with 6 clinicians (3 untrained and 3 trained in artifact detection). Inter‐rater reliability was calculated using Fleiss' kappa. KEY RESULTS: Inter‐rater reliability was 0.84 (95% CI:0.77–0.90) among experts, 0.76 (95% CI:0.68–0.83) among untrained clinicians, and 0.71 (95% CI:0.62–0.79) among trained clinicians. The sensitivity and specificity of the algorithm against experts was 96% (95% CI:91%–100%) and 95% (95% CI:90%–99%), respectively, vs 77% (95% CI:68%–85%) and 99% (95% CI:96%–100%) against untrained clinicians, and 97% (95% CI:92%–100%) and 88% (95% CI:82%–94%) against trained clinicians. CONCLUSIONS & INFERENCES: An automated artifact detection and rejection algorithm was developed showing >95% sensitivity and specificity vs expert markers. This algorithm overcomes an important challenge in the clinical translation of BSGM and is now being routinely implemented in patient test interpretations.
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spelling pubmed-97862722022-12-27 An automated artifact detection and rejection system for body surface gastric mapping Calder, Stefan Schamberg, Gabriel Varghese, Chris Waite, Stephen Sebaratnam, Gabrielle Woodhead, Jonathan S. T. Du, Peng Andrews, Christopher N. O'Grady, Greg Gharibans, Armen A. Neurogastroenterol Motil Technical Note BACKGROUND: Body surface gastric mapping (BSGM) is a new clinical tool for gastric motility diagnostics, providing high‐resolution data on gastric myoelectrical activity. Artifact contamination was a key challenge to reliable test interpretation in traditional electrogastrography. This study aimed to introduce and validate an automated artifact detection and rejection system for clinical BSGM applications. METHODS: Ten patients with chronic gastric symptoms generated a variety of artifacts according to a standardized protocol (176 recordings) using a commercial BSGM system (Alimetry, New Zealand). An automated artifact detection and rejection algorithm was developed, and its performance was compared with a reference standard comprising consensus labeling by 3 analysis experts, followed by comparison with 6 clinicians (3 untrained and 3 trained in artifact detection). Inter‐rater reliability was calculated using Fleiss' kappa. KEY RESULTS: Inter‐rater reliability was 0.84 (95% CI:0.77–0.90) among experts, 0.76 (95% CI:0.68–0.83) among untrained clinicians, and 0.71 (95% CI:0.62–0.79) among trained clinicians. The sensitivity and specificity of the algorithm against experts was 96% (95% CI:91%–100%) and 95% (95% CI:90%–99%), respectively, vs 77% (95% CI:68%–85%) and 99% (95% CI:96%–100%) against untrained clinicians, and 97% (95% CI:92%–100%) and 88% (95% CI:82%–94%) against trained clinicians. CONCLUSIONS & INFERENCES: An automated artifact detection and rejection algorithm was developed showing >95% sensitivity and specificity vs expert markers. This algorithm overcomes an important challenge in the clinical translation of BSGM and is now being routinely implemented in patient test interpretations. John Wiley and Sons Inc. 2022-06-14 2022-11 /pmc/articles/PMC9786272/ /pubmed/35699347 http://dx.doi.org/10.1111/nmo.14421 Text en © 2022 The Authors. Neurogastroenterology & Motility published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Technical Note
Calder, Stefan
Schamberg, Gabriel
Varghese, Chris
Waite, Stephen
Sebaratnam, Gabrielle
Woodhead, Jonathan S. T.
Du, Peng
Andrews, Christopher N.
O'Grady, Greg
Gharibans, Armen A.
An automated artifact detection and rejection system for body surface gastric mapping
title An automated artifact detection and rejection system for body surface gastric mapping
title_full An automated artifact detection and rejection system for body surface gastric mapping
title_fullStr An automated artifact detection and rejection system for body surface gastric mapping
title_full_unstemmed An automated artifact detection and rejection system for body surface gastric mapping
title_short An automated artifact detection and rejection system for body surface gastric mapping
title_sort automated artifact detection and rejection system for body surface gastric mapping
topic Technical Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9786272/
https://www.ncbi.nlm.nih.gov/pubmed/35699347
http://dx.doi.org/10.1111/nmo.14421
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