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Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome

Idiopathic pulmonary fibrosis (IPF) is an age-related interstitial lung disease with a high incidence in the elderly. Although many reports have shown that senescence can initiate pulmonary fibrosis, the relationship between aging and pulmonary fibrosis has not been explained systematically. In our...

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Autores principales: Fu, San, Tang, Xiaoyan, Xu, Yiming, Song, Xianrui, Qian, Xiuhui, Hu, Yingying, Zhang, Mian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788318/
https://www.ncbi.nlm.nih.gov/pubmed/36556326
http://dx.doi.org/10.3390/life12121961
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author Fu, San
Tang, Xiaoyan
Xu, Yiming
Song, Xianrui
Qian, Xiuhui
Hu, Yingying
Zhang, Mian
author_facet Fu, San
Tang, Xiaoyan
Xu, Yiming
Song, Xianrui
Qian, Xiuhui
Hu, Yingying
Zhang, Mian
author_sort Fu, San
collection PubMed
description Idiopathic pulmonary fibrosis (IPF) is an age-related interstitial lung disease with a high incidence in the elderly. Although many reports have shown that senescence can initiate pulmonary fibrosis, the relationship between aging and pulmonary fibrosis has not been explained systematically. In our study, young and old rats were intratracheally instilled with bleomycin (1 mg/kg), and the basic pathological indexes were determined using a commercial kit, hematoxylin, and eosin (H&E) and Masson’s Trichrome staining, immunohistochemistry, immunohistofluorescence, and q-PCR. Then, the lung tissues of rats were sequenced by next-generation sequencing for transcriptome analysis. Bioinformatics was performed to analyze the possible differences in the mechanism of pulmonary fibrosis between aged and young rats. Finally, the related cytokines were determined by q-PCR and ELISA. The results indicate that pulmonary fibrosis in old rats is more serious than that in young rats under the same conditions. Additionally, transcriptomic and bioinformatics analysis with experimental validation indicate that the differences in pulmonary fibrosis between old and young rats are mainly related to the differential expression of cytokines, extracellular matrix (ECM), and other important signaling pathways. In conclusion, aging mainly affects pulmonary fibrosis through the ECM–receptor interaction, immune response, and chemokines.
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spelling pubmed-97883182022-12-24 Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome Fu, San Tang, Xiaoyan Xu, Yiming Song, Xianrui Qian, Xiuhui Hu, Yingying Zhang, Mian Life (Basel) Article Idiopathic pulmonary fibrosis (IPF) is an age-related interstitial lung disease with a high incidence in the elderly. Although many reports have shown that senescence can initiate pulmonary fibrosis, the relationship between aging and pulmonary fibrosis has not been explained systematically. In our study, young and old rats were intratracheally instilled with bleomycin (1 mg/kg), and the basic pathological indexes were determined using a commercial kit, hematoxylin, and eosin (H&E) and Masson’s Trichrome staining, immunohistochemistry, immunohistofluorescence, and q-PCR. Then, the lung tissues of rats were sequenced by next-generation sequencing for transcriptome analysis. Bioinformatics was performed to analyze the possible differences in the mechanism of pulmonary fibrosis between aged and young rats. Finally, the related cytokines were determined by q-PCR and ELISA. The results indicate that pulmonary fibrosis in old rats is more serious than that in young rats under the same conditions. Additionally, transcriptomic and bioinformatics analysis with experimental validation indicate that the differences in pulmonary fibrosis between old and young rats are mainly related to the differential expression of cytokines, extracellular matrix (ECM), and other important signaling pathways. In conclusion, aging mainly affects pulmonary fibrosis through the ECM–receptor interaction, immune response, and chemokines. MDPI 2022-11-23 /pmc/articles/PMC9788318/ /pubmed/36556326 http://dx.doi.org/10.3390/life12121961 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fu, San
Tang, Xiaoyan
Xu, Yiming
Song, Xianrui
Qian, Xiuhui
Hu, Yingying
Zhang, Mian
Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title_full Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title_fullStr Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title_full_unstemmed Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title_short Analysis of the Potential Relationship between Aging and Pulmonary Fibrosis Based on Transcriptome
title_sort analysis of the potential relationship between aging and pulmonary fibrosis based on transcriptome
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788318/
https://www.ncbi.nlm.nih.gov/pubmed/36556326
http://dx.doi.org/10.3390/life12121961
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