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An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788828/ https://www.ncbi.nlm.nih.gov/pubmed/36354233 http://dx.doi.org/10.7554/eLife.69008 |
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author | McKay, Andrew Costa, Emma K Chen, Jingxun Hu, Chi-Kuo Chen, Xiaoshan Bedbrook, Claire N Khondker, Rishad C Thielvoldt, Mike Priya Singh, Param Wyss-Coray, Tony Brunet, Anne |
author_facet | McKay, Andrew Costa, Emma K Chen, Jingxun Hu, Chi-Kuo Chen, Xiaoshan Bedbrook, Claire N Khondker, Rishad C Thielvoldt, Mike Priya Singh, Param Wyss-Coray, Tony Brunet, Anne |
author_sort | McKay, Andrew |
collection | PubMed |
description | The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed to be open-source, easily transferable, and built from widely available components. Compared to manual feeding, our automated system is highly precise and flexible. As a proof of concept for the feeding flexibility of these automated feeders, we define a favorable regimen for growth and fertility for the African killifish and a dietary restriction regimen where both feeding time and quantity are reduced. We show that this dietary restriction regimen extends lifespan in males (but not in females) and impacts the transcriptomes of killifish livers in a sex-specific manner. Moreover, combining our automated feeding system with a video camera, we establish a quantitative associative learning assay to provide an integrative measure of cognitive performance for the killifish. The ability to precisely control food delivery in the killifish opens new areas to assess lifespan and cognitive behavior dynamics and to screen for dietary interventions and drugs in a scalable manner previously impossible with traditional vertebrate model organisms. |
format | Online Article Text |
id | pubmed-9788828 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-97888282022-12-24 An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning McKay, Andrew Costa, Emma K Chen, Jingxun Hu, Chi-Kuo Chen, Xiaoshan Bedbrook, Claire N Khondker, Rishad C Thielvoldt, Mike Priya Singh, Param Wyss-Coray, Tony Brunet, Anne eLife Genetics and Genomics The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed to be open-source, easily transferable, and built from widely available components. Compared to manual feeding, our automated system is highly precise and flexible. As a proof of concept for the feeding flexibility of these automated feeders, we define a favorable regimen for growth and fertility for the African killifish and a dietary restriction regimen where both feeding time and quantity are reduced. We show that this dietary restriction regimen extends lifespan in males (but not in females) and impacts the transcriptomes of killifish livers in a sex-specific manner. Moreover, combining our automated feeding system with a video camera, we establish a quantitative associative learning assay to provide an integrative measure of cognitive performance for the killifish. The ability to precisely control food delivery in the killifish opens new areas to assess lifespan and cognitive behavior dynamics and to screen for dietary interventions and drugs in a scalable manner previously impossible with traditional vertebrate model organisms. eLife Sciences Publications, Ltd 2022-11-10 /pmc/articles/PMC9788828/ /pubmed/36354233 http://dx.doi.org/10.7554/eLife.69008 Text en © 2022, McKay, Costa, Chen et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Genetics and Genomics McKay, Andrew Costa, Emma K Chen, Jingxun Hu, Chi-Kuo Chen, Xiaoshan Bedbrook, Claire N Khondker, Rishad C Thielvoldt, Mike Priya Singh, Param Wyss-Coray, Tony Brunet, Anne An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title | An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title_full | An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title_fullStr | An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title_full_unstemmed | An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title_short | An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
title_sort | automated feeding system for the african killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning |
topic | Genetics and Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788828/ https://www.ncbi.nlm.nih.gov/pubmed/36354233 http://dx.doi.org/10.7554/eLife.69008 |
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