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An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning

The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed...

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Autores principales: McKay, Andrew, Costa, Emma K, Chen, Jingxun, Hu, Chi-Kuo, Chen, Xiaoshan, Bedbrook, Claire N, Khondker, Rishad C, Thielvoldt, Mike, Priya Singh, Param, Wyss-Coray, Tony, Brunet, Anne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788828/
https://www.ncbi.nlm.nih.gov/pubmed/36354233
http://dx.doi.org/10.7554/eLife.69008
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author McKay, Andrew
Costa, Emma K
Chen, Jingxun
Hu, Chi-Kuo
Chen, Xiaoshan
Bedbrook, Claire N
Khondker, Rishad C
Thielvoldt, Mike
Priya Singh, Param
Wyss-Coray, Tony
Brunet, Anne
author_facet McKay, Andrew
Costa, Emma K
Chen, Jingxun
Hu, Chi-Kuo
Chen, Xiaoshan
Bedbrook, Claire N
Khondker, Rishad C
Thielvoldt, Mike
Priya Singh, Param
Wyss-Coray, Tony
Brunet, Anne
author_sort McKay, Andrew
collection PubMed
description The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed to be open-source, easily transferable, and built from widely available components. Compared to manual feeding, our automated system is highly precise and flexible. As a proof of concept for the feeding flexibility of these automated feeders, we define a favorable regimen for growth and fertility for the African killifish and a dietary restriction regimen where both feeding time and quantity are reduced. We show that this dietary restriction regimen extends lifespan in males (but not in females) and impacts the transcriptomes of killifish livers in a sex-specific manner. Moreover, combining our automated feeding system with a video camera, we establish a quantitative associative learning assay to provide an integrative measure of cognitive performance for the killifish. The ability to precisely control food delivery in the killifish opens new areas to assess lifespan and cognitive behavior dynamics and to screen for dietary interventions and drugs in a scalable manner previously impossible with traditional vertebrate model organisms.
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spelling pubmed-97888282022-12-24 An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning McKay, Andrew Costa, Emma K Chen, Jingxun Hu, Chi-Kuo Chen, Xiaoshan Bedbrook, Claire N Khondker, Rishad C Thielvoldt, Mike Priya Singh, Param Wyss-Coray, Tony Brunet, Anne eLife Genetics and Genomics The African turquoise killifish is an exciting new vertebrate model for aging studies. A significant challenge for any model organism is the control over its diet in space and time. To address this challenge, we created an automated and networked fish feeding system. Our automated feeder is designed to be open-source, easily transferable, and built from widely available components. Compared to manual feeding, our automated system is highly precise and flexible. As a proof of concept for the feeding flexibility of these automated feeders, we define a favorable regimen for growth and fertility for the African killifish and a dietary restriction regimen where both feeding time and quantity are reduced. We show that this dietary restriction regimen extends lifespan in males (but not in females) and impacts the transcriptomes of killifish livers in a sex-specific manner. Moreover, combining our automated feeding system with a video camera, we establish a quantitative associative learning assay to provide an integrative measure of cognitive performance for the killifish. The ability to precisely control food delivery in the killifish opens new areas to assess lifespan and cognitive behavior dynamics and to screen for dietary interventions and drugs in a scalable manner previously impossible with traditional vertebrate model organisms. eLife Sciences Publications, Ltd 2022-11-10 /pmc/articles/PMC9788828/ /pubmed/36354233 http://dx.doi.org/10.7554/eLife.69008 Text en © 2022, McKay, Costa, Chen et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Genetics and Genomics
McKay, Andrew
Costa, Emma K
Chen, Jingxun
Hu, Chi-Kuo
Chen, Xiaoshan
Bedbrook, Claire N
Khondker, Rishad C
Thielvoldt, Mike
Priya Singh, Param
Wyss-Coray, Tony
Brunet, Anne
An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title_full An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title_fullStr An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title_full_unstemmed An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title_short An automated feeding system for the African killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
title_sort automated feeding system for the african killifish reveals the impact of diet on lifespan and allows scalable assessment of associative learning
topic Genetics and Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788828/
https://www.ncbi.nlm.nih.gov/pubmed/36354233
http://dx.doi.org/10.7554/eLife.69008
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