Cargando…

Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes

BACKGROUND: The oxidation-reduction (redox) status of the cell influences or regulates transcription factors and enzymes involved in epigenetic changes, such as DNA methylation, histone protein modifications, and chromatin structure and remodeling. These changes are crucial regulators of chromatin a...

Descripción completa

Detalles Bibliográficos
Autores principales: Ramakrishnan, Muthusamy, Papolu, Pradeep K., Satish, Lakkakula, Vinod, Kunnummal Kurungara, Wei, Qiang, Sharma, Anket, Emamverdian, Abolghassem, Zou, Long-Hai, Zhou, Mingbing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788946/
https://www.ncbi.nlm.nih.gov/pubmed/35690579
http://dx.doi.org/10.1016/j.jare.2022.04.007
_version_ 1784858867333595136
author Ramakrishnan, Muthusamy
Papolu, Pradeep K.
Satish, Lakkakula
Vinod, Kunnummal Kurungara
Wei, Qiang
Sharma, Anket
Emamverdian, Abolghassem
Zou, Long-Hai
Zhou, Mingbing
author_facet Ramakrishnan, Muthusamy
Papolu, Pradeep K.
Satish, Lakkakula
Vinod, Kunnummal Kurungara
Wei, Qiang
Sharma, Anket
Emamverdian, Abolghassem
Zou, Long-Hai
Zhou, Mingbing
author_sort Ramakrishnan, Muthusamy
collection PubMed
description BACKGROUND: The oxidation-reduction (redox) status of the cell influences or regulates transcription factors and enzymes involved in epigenetic changes, such as DNA methylation, histone protein modifications, and chromatin structure and remodeling. These changes are crucial regulators of chromatin architecture, leading to differential gene expression in eukaryotes. But the cell’s redox homeostasis is difficult to sustain since the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) is not equal in plants at different developmental stages and under abiotic stress conditions. Exceeding optimum ROS and RNS levels leads to oxidative stress and thus alters the redox status of the cell. Consequently, this alteration modulates intracellular epigenetic modifications that either mitigate or mediate the plant growth and stress response. AIM OF REVIEW: Recent studies suggest that the altered redox status of the cell reform the cellular functions and epigenetic changes. Recent high-throughput techniques have also greatly advanced redox-mediated gene expression discovery, but the integrated view of the redox status, and its associations with epigenetic changes and subsequent gene expression in plants are still scarce. In this review, we accordingly focus on how the redox status of the cell affects epigenetic modifications in plants under abiotic stress conditions and during developmental processes. This is a first comprehensive review on the redox status of the cell covering the redox components and signaling, redox status alters the post-translational modification of proteins, intracellular epigenetic modifications, redox interplay during DNA methylation, redox regulation of histone acetylation and methylation, redox regulation of miRNA biogenesis, redox regulation of chromatin structure and remodeling and conclusion, future perspectives and biotechnological opportunities for the future development of the plants. KEY SCIENTIFIC CONCEPTS OF REVIEW: The interaction of redox mediators such as ROS, RNS and antioxidants regulates redox homeostasis and redox-mediated epigenetic changes. We discuss how redox mediators modulate epigenetic changes and show the opportunities for smart use of the redox status of the cell in plant development and abiotic stress adaptation. However, how a redox mediator triggers epigenetic modification without activating other redox mediators remains yet unknown.
format Online
Article
Text
id pubmed-9788946
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-97889462022-12-25 Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes Ramakrishnan, Muthusamy Papolu, Pradeep K. Satish, Lakkakula Vinod, Kunnummal Kurungara Wei, Qiang Sharma, Anket Emamverdian, Abolghassem Zou, Long-Hai Zhou, Mingbing J Adv Res Original Article BACKGROUND: The oxidation-reduction (redox) status of the cell influences or regulates transcription factors and enzymes involved in epigenetic changes, such as DNA methylation, histone protein modifications, and chromatin structure and remodeling. These changes are crucial regulators of chromatin architecture, leading to differential gene expression in eukaryotes. But the cell’s redox homeostasis is difficult to sustain since the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) is not equal in plants at different developmental stages and under abiotic stress conditions. Exceeding optimum ROS and RNS levels leads to oxidative stress and thus alters the redox status of the cell. Consequently, this alteration modulates intracellular epigenetic modifications that either mitigate or mediate the plant growth and stress response. AIM OF REVIEW: Recent studies suggest that the altered redox status of the cell reform the cellular functions and epigenetic changes. Recent high-throughput techniques have also greatly advanced redox-mediated gene expression discovery, but the integrated view of the redox status, and its associations with epigenetic changes and subsequent gene expression in plants are still scarce. In this review, we accordingly focus on how the redox status of the cell affects epigenetic modifications in plants under abiotic stress conditions and during developmental processes. This is a first comprehensive review on the redox status of the cell covering the redox components and signaling, redox status alters the post-translational modification of proteins, intracellular epigenetic modifications, redox interplay during DNA methylation, redox regulation of histone acetylation and methylation, redox regulation of miRNA biogenesis, redox regulation of chromatin structure and remodeling and conclusion, future perspectives and biotechnological opportunities for the future development of the plants. KEY SCIENTIFIC CONCEPTS OF REVIEW: The interaction of redox mediators such as ROS, RNS and antioxidants regulates redox homeostasis and redox-mediated epigenetic changes. We discuss how redox mediators modulate epigenetic changes and show the opportunities for smart use of the redox status of the cell in plant development and abiotic stress adaptation. However, how a redox mediator triggers epigenetic modification without activating other redox mediators remains yet unknown. Elsevier 2022-04-28 /pmc/articles/PMC9788946/ /pubmed/35690579 http://dx.doi.org/10.1016/j.jare.2022.04.007 Text en © 2022 The Authors. Published by Elsevier B.V. on behalf of Cairo University. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Ramakrishnan, Muthusamy
Papolu, Pradeep K.
Satish, Lakkakula
Vinod, Kunnummal Kurungara
Wei, Qiang
Sharma, Anket
Emamverdian, Abolghassem
Zou, Long-Hai
Zhou, Mingbing
Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title_full Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title_fullStr Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title_full_unstemmed Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title_short Redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
title_sort redox status of the plant cell determines epigenetic modifications under abiotic stress conditions and during developmental processes
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9788946/
https://www.ncbi.nlm.nih.gov/pubmed/35690579
http://dx.doi.org/10.1016/j.jare.2022.04.007
work_keys_str_mv AT ramakrishnanmuthusamy redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT papolupradeepk redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT satishlakkakula redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT vinodkunnummalkurungara redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT weiqiang redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT sharmaanket redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT emamverdianabolghassem redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT zoulonghai redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses
AT zhoumingbing redoxstatusoftheplantcelldeterminesepigeneticmodificationsunderabioticstressconditionsandduringdevelopmentalprocesses