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Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks
The ionization edges encoded in the electron energy loss spectroscopy (EELS) spectra enable advanced material analysis including composition analyses and elemental quantifications. The development of the parallel EELS instrument and fast, sensitive detectors have greatly improved the acquisition spe...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9789080/ https://www.ncbi.nlm.nih.gov/pubmed/36564412 http://dx.doi.org/10.1038/s41598-022-25870-3 |
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author | Kong, Lingli Ji, Zhengran Xin, Huolin L. |
author_facet | Kong, Lingli Ji, Zhengran Xin, Huolin L. |
author_sort | Kong, Lingli |
collection | PubMed |
description | The ionization edges encoded in the electron energy loss spectroscopy (EELS) spectra enable advanced material analysis including composition analyses and elemental quantifications. The development of the parallel EELS instrument and fast, sensitive detectors have greatly improved the acquisition speed of EELS spectra. However, the traditional way of core-loss edge recognition is experience based and human labor dependent, which limits the processing speed. So far, the low signal–noise ratio and the low jump ratio of the core-loss edges on the raw EELS spectra have been challenging for the automation of edge recognition. In this work, a convolutional-bidirectional long short-term memory neural network (CNN-BiLSTM) is proposed to automate the detection and elemental identification of core-loss edges from raw spectra. An EELS spectral database is synthesized by using our forward model to assist in the training and validation of the neural network. To make the synthesized spectra resemble the real spectra, we collected a large library of experimentally acquired EELS core edges. In synthesize the training library, the edges are modeled by fitting the multi-Gaussian model to the real edges from experiments, and the noise and instrumental imperfectness are simulated and added. The well-trained CNN-BiLSTM network is tested against both the simulated spectra and real spectra collected from experiments. The high accuracy of the network, 94.9%, proves that, without complicated preprocessing of the raw spectra, the proposed CNN-BiLSTM network achieves the automation of core-loss edge recognition for EELS spectra with high accuracy. |
format | Online Article Text |
id | pubmed-9789080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-97890802022-12-25 Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks Kong, Lingli Ji, Zhengran Xin, Huolin L. Sci Rep Article The ionization edges encoded in the electron energy loss spectroscopy (EELS) spectra enable advanced material analysis including composition analyses and elemental quantifications. The development of the parallel EELS instrument and fast, sensitive detectors have greatly improved the acquisition speed of EELS spectra. However, the traditional way of core-loss edge recognition is experience based and human labor dependent, which limits the processing speed. So far, the low signal–noise ratio and the low jump ratio of the core-loss edges on the raw EELS spectra have been challenging for the automation of edge recognition. In this work, a convolutional-bidirectional long short-term memory neural network (CNN-BiLSTM) is proposed to automate the detection and elemental identification of core-loss edges from raw spectra. An EELS spectral database is synthesized by using our forward model to assist in the training and validation of the neural network. To make the synthesized spectra resemble the real spectra, we collected a large library of experimentally acquired EELS core edges. In synthesize the training library, the edges are modeled by fitting the multi-Gaussian model to the real edges from experiments, and the noise and instrumental imperfectness are simulated and added. The well-trained CNN-BiLSTM network is tested against both the simulated spectra and real spectra collected from experiments. The high accuracy of the network, 94.9%, proves that, without complicated preprocessing of the raw spectra, the proposed CNN-BiLSTM network achieves the automation of core-loss edge recognition for EELS spectra with high accuracy. Nature Publishing Group UK 2022-12-23 /pmc/articles/PMC9789080/ /pubmed/36564412 http://dx.doi.org/10.1038/s41598-022-25870-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kong, Lingli Ji, Zhengran Xin, Huolin L. Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title | Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title_full | Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title_fullStr | Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title_full_unstemmed | Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title_short | Electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
title_sort | electron energy loss spectroscopy database synthesis and automation of core-loss edge recognition by deep-learning neural networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9789080/ https://www.ncbi.nlm.nih.gov/pubmed/36564412 http://dx.doi.org/10.1038/s41598-022-25870-3 |
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