Cargando…

Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)

Three novel peptide sequences YGIKVGYAIP, GGIF, and GIFE from papain-generated protein hydrolysate of palm kernel cake proteins were used for stability study against ACE, ACE-inhibition kinetics, and molecular docking studies. Results showed that peptide YGIKVGYAIP was degraded, and its ACE-inhibito...

Descripción completa

Detalles Bibliográficos
Autores principales: Zarei, Mohammad, Ghanbari, Raheleh, Zainal, Najib, Ovissipour, Reza, Saari, Nazamid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9789325/
https://www.ncbi.nlm.nih.gov/pubmed/36573107
http://dx.doi.org/10.1016/j.fochms.2022.100147
_version_ 1784858927786098688
author Zarei, Mohammad
Ghanbari, Raheleh
Zainal, Najib
Ovissipour, Reza
Saari, Nazamid
author_facet Zarei, Mohammad
Ghanbari, Raheleh
Zainal, Najib
Ovissipour, Reza
Saari, Nazamid
author_sort Zarei, Mohammad
collection PubMed
description Three novel peptide sequences YGIKVGYAIP, GGIF, and GIFE from papain-generated protein hydrolysate of palm kernel cake proteins were used for stability study against ACE, ACE-inhibition kinetics, and molecular docking studies. Results showed that peptide YGIKVGYAIP was degraded, and its ACE-inhibitory activity decreased after 3 h pre-incubation with ACE, while peptides GGIF and GIFE were resistant. However, although the ACE-inhibitory activity of GIFE increased during this time, the ACE inhibitory activity of GGIF decreased after pre-incubation with ACE, indicating that peptide. YGIKVGYAIP and GGIF are substrate-type, whereas GIFE is a true-inhibitor type. Peptide YGIKVGYAIP showed the lowest K(i) (0.054 mM) in the inhibition kinetics study compared to GGIF and GIFE, with K(i) of 1.27 m M and 18 mM, respectively. In addition, YGIKVGYAIP revealed the lowest K(m) and V(max) and higher CE in different peptide concentrations, implying that the enzyme catalysis decreased, and peptides had some binding affinity to the enzyme in lower concentrations, which led to reduced catalytic ability. Furthermore, YGIKVGYAIP showed the lowest docking score of −14.733 and 21 interactions with tACE, while GGIF revealed the higher docking score of −8.006 with 15 interactions with tACE.
format Online
Article
Text
id pubmed-9789325
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-97893252022-12-25 Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE) Zarei, Mohammad Ghanbari, Raheleh Zainal, Najib Ovissipour, Reza Saari, Nazamid Food Chem (Oxf) Research Article Three novel peptide sequences YGIKVGYAIP, GGIF, and GIFE from papain-generated protein hydrolysate of palm kernel cake proteins were used for stability study against ACE, ACE-inhibition kinetics, and molecular docking studies. Results showed that peptide YGIKVGYAIP was degraded, and its ACE-inhibitory activity decreased after 3 h pre-incubation with ACE, while peptides GGIF and GIFE were resistant. However, although the ACE-inhibitory activity of GIFE increased during this time, the ACE inhibitory activity of GGIF decreased after pre-incubation with ACE, indicating that peptide. YGIKVGYAIP and GGIF are substrate-type, whereas GIFE is a true-inhibitor type. Peptide YGIKVGYAIP showed the lowest K(i) (0.054 mM) in the inhibition kinetics study compared to GGIF and GIFE, with K(i) of 1.27 m M and 18 mM, respectively. In addition, YGIKVGYAIP revealed the lowest K(m) and V(max) and higher CE in different peptide concentrations, implying that the enzyme catalysis decreased, and peptides had some binding affinity to the enzyme in lower concentrations, which led to reduced catalytic ability. Furthermore, YGIKVGYAIP showed the lowest docking score of −14.733 and 21 interactions with tACE, while GGIF revealed the higher docking score of −8.006 with 15 interactions with tACE. Elsevier 2022-11-17 /pmc/articles/PMC9789325/ /pubmed/36573107 http://dx.doi.org/10.1016/j.fochms.2022.100147 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Zarei, Mohammad
Ghanbari, Raheleh
Zainal, Najib
Ovissipour, Reza
Saari, Nazamid
Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title_full Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title_fullStr Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title_full_unstemmed Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title_short Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE)
title_sort inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ace)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9789325/
https://www.ncbi.nlm.nih.gov/pubmed/36573107
http://dx.doi.org/10.1016/j.fochms.2022.100147
work_keys_str_mv AT zareimohammad inhibitionkineticsmoleculardockingandstabilitystudiesoftheeffectofpapaingeneratedpeptidesfrompalmkernelcakeproteinsonangiotensinconvertingenzymeace
AT ghanbariraheleh inhibitionkineticsmoleculardockingandstabilitystudiesoftheeffectofpapaingeneratedpeptidesfrompalmkernelcakeproteinsonangiotensinconvertingenzymeace
AT zainalnajib inhibitionkineticsmoleculardockingandstabilitystudiesoftheeffectofpapaingeneratedpeptidesfrompalmkernelcakeproteinsonangiotensinconvertingenzymeace
AT ovissipourreza inhibitionkineticsmoleculardockingandstabilitystudiesoftheeffectofpapaingeneratedpeptidesfrompalmkernelcakeproteinsonangiotensinconvertingenzymeace
AT saarinazamid inhibitionkineticsmoleculardockingandstabilitystudiesoftheeffectofpapaingeneratedpeptidesfrompalmkernelcakeproteinsonangiotensinconvertingenzymeace