Cargando…

Metabarcoding of bacteria and parasites in the gut of Apodemus agrarius

BACKGROUND: The striped field mouse Apodemus agrarius is a wild rodent commonly found in fields in Korea. It is a known carrier of various pathogens. Amplicon-based next-generation sequencing (NGS) targeting the 16S ribosomal RNA (rRNA) gene is the most common technique used to analyze the bacterial...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kim, Soo Lim, Choi, Jun Ho, Yi, Myung-hee, Lee, Seogwon, Kim, Myungjun, Oh, Singeun, Lee, In-Yong, Jeon, Bo-Young, Yong, Tai-Soon, Kim, Ju Yeong
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2022
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9789561/ https://www.ncbi.nlm.nih.gov/pubmed/36564849 http://dx.doi.org/10.1186/s13071-022-05608-w

Ejemplares similares

Geographical Distribution and Epidemiologic Factors of Chigger Mites on Apodemus agrarius during Autumn in Korea
por: Lee, In Yong, et al.
Publicado: (2021)

Adiaspiromycosis of an Apodemus agrarius captured wild rodent in Korea
por: Kim, Tae-Hyoun, et al.
Publicado: (2012)

Genetic evidence of Dobrava virus in Apodemus agrarius in Hungary.
por: Scharninghausen, J J, et al.
Publicado: (1999)

Comparison of helminth community of Apodemus agrarius and Apodemus flavicollis between urban and suburban populations of mice
por: Dwużnik, Dorota, et al.
Publicado: (2017)

Detection of sarcocystic infection in a wild rodent (Apodemus agrarius chejuensis) captured on Jeju island
por: Kim, Tae-Hyoun, et al.
Publicado: (2011)

Complete Genome Sequencing and Comparative Genomic Analysis of Helicobacter Apodemus Isolated From the Wild Korean Striped Field Mouse (Apodemus agrarius) for Potential Pathogenicity
por: Kim, Junhyung, et al.
Publicado: (2018)

Multiplex PCR-Based Nanopore Sequencing and Epidemiological Surveillance of Hantaan orthohantavirus in Apodemus agrarius, Republic of Korea
por: Park, Kyungmin, et al.
Publicado: (2021)

Comparison of targeted next-generation sequencing for whole-genome sequencing of Hantaan orthohantavirus in Apodemus agrarius lung tissues
por: No, Jin Sun, et al.
Publicado: (2019)

Development of 17 polymorphic microsatellite loci from Jeju striped field mouse, Apodemus agrarius chejuensis (Rodentia: Muridae), by 454 pyrosequencing
por: Kim, Han-Na, et al.
Publicado: (2018)

Production of Dermatophagoides farinae Having Low Bacterial Content Using Ampicillin
por: Kim, Ju Yeong, et al.
Publicado: (2023)

Intestinal Helminthic Infections in Striped Field Mice, Apodemus agrarius, from Two Southern Regions of Korea
por: Sohn, Woon-Mok, et al.
Publicado: (2014)

A Report of Chigger Mites on the Striped Field Mouse, Apodemus agrarius, in Southwest China
por: Chen, Yan-Ling, et al.
Publicado: (2021)

Infections of Intestinal Helminth at Two Species of Field Mice, Apodemus agrarius and A. Peninsulae, in Gangwondo and Chungcheongnam-do, Korea
por: Lee, Jae-Hyung, et al.
Publicado: (2018)

Measuring the absolute abundance of the microbiome by adding yeast containing 16S rRNA gene from a hyperthermophile
por: Kim, Ju Yeong, et al.
Publicado: (2021)

First report of Borrelia burgdorferi sensu stricto detection in a commune genospecies in Apodemus agrarius in Gwangju, South Korea
por: Kim, Choon Mee, et al.
Publicado: (2021)

Morphological and Molecular Characterization of Toxocara apodemi (Nematoda: Ascarididae) from Striped Field Mice, Apodemus agrarius, in Korea
por: Kim, Hyeon Cheol, et al.
Publicado: (2020)

Ampicillin treated German cockroach extract leads to reduced inflammation in human lung cells and a mouse model of Asthma
por: Lee, Seogwon, et al.
Publicado: (2023)

A novel genotype of Hantaan orthohantavirus harbored by Apodemus agrarius chejuensis as a potential etiologic agent of hemorrhagic fever with renal syndrome in Republic of Korea
por: Park, Kyungmin, et al.
Publicado: (2021)

Intestinal parasitic infections among children aged 12–59 months in Nyamasheke District, Rwanda
por: Hakizimana, Evariste, et al.
Publicado: (2023)

Description of the Nymphal Stages of Hoplopleura affinis (Anoplura: Hoplopleuridae) from the Striped Field Mouse Apodemus agrarius with a Global Checklist of Hoplopleura Species from the Genus Apodemus
por: Kozina, Paulina, et al.
Publicado: (2022)

Absence of spermatozoal CD46 protein expression and associated rapid acrosome reaction rate in striped field mice (Apodemus agrarius)
por: Clift, Leanne E, et al.
Publicado: (2009)

Phylogeography of the striped field mouse (Apodemus agrarius Pallas, 1771) in light of new data from central part of Northern Eurasia
por: Yalkovskaya, Lidia, et al.
Publicado: (2022)

Reduced production of the major allergens Bla g 1 and Bla g 2 in Blattella germanica after antibiotic treatment
por: Lee, Seogwon, et al.
Publicado: (2021)

Heligmosomoides neopolygyrus Asakawa & Ohbayashi, 1986, a cryptic Asian nematode infecting the striped field mouse Apodemus agrarius in Central Europe
por: Zaleśny, Grzegorz, et al.
Publicado: (2014)

Comparative microbiomes of ticks collected from a black rhino and its surrounding environment
por: Lee, Seogwon, et al.
Publicado: (2019)

Range Dynamics of Striped Field Mouse (Apodemus agrarius) in Northern Eurasia under Global Climate Change Based on Ensemble Species Distribution Models
por: Petrosyan, Varos, et al.
Publicado: (2023)

Microbiome of Haemaphysalis longicornis Tick in Korea
por: Kim, Myungjun, et al.
Publicado: (2021)

Importance of Balanced Attention Toward Coronavirus Disease 2019 and Neglected Tropical Diseases
por: Kim, Ju Yeong, et al.
Publicado: (2023)

Investigating the microbiome of house dust mites in South Korea
por: Yi, Myung-hee, et al.
Publicado: (2023)

Molecular Identification of Bacillus Isolated from Korean Water Deer (Hydropotes inermis argyropus) and Striped Field Mouse (Apodemus agrarius) Feces by Using an SNP-Based 16S Ribosomal Marker
por: Rahman, Md-Mafizur, et al.
Publicado: (2022)

Comparative Microbiome Analysis of Three Species of Laboratory-Reared Periplaneta Cockroaches
por: Lee, Seogwon, et al.
Publicado: (2020)

Anisakis pegreffii Extract Induces Airway Inflammation with Airway Remodeling in a Murine Model System
por: Choi, Jun Ho, et al.
Publicado: (2021)

Parasitic infections and medical expenses according to Health Insurance Review Assessment claims data in South Korea, 2011–2018
por: Kim, Ju Yeong, et al.
Publicado: (2019)

Diagnosis of Balamuthia mandrillaris Encephalitis by Thymine-Adenine Cloning Using Universal Eukaryotic Primers
por: Kim, Ju Yeong, et al.
Publicado: (2022)

Population structure of Apodemus flavicollis and comparison to Apodemus sylvaticus in northern Poland based on RAD-seq
por: Martin Cerezo, Maria Luisa, et al.
Publicado: (2020)

Possible Influence of B Chromosomes on Genes Included in Immune Response and Parasite Burden in Apodemus flavicollis
por: Adnađević, Tanja, et al.
Publicado: (2014)

Helicobacter apodemus sp. nov., a new Helicobacter species identified from the gastrointestinal tract of striped field mice in Korea
por: Jeon, Woo Jin, et al.
Publicado: (2015)

Correction: Possible Influence of B Chromosomes on Genes Included in Immune Response and Parasite Burden in Apodemus flavicollis
Publicado: (2015)

Canalization and developmental stability of the yellow-necked mouse (Apodemus flavicollis) mandible and cranium related to age and nematode parasitism
por: Jojić, Vida, et al.
Publicado: (2021)

Marine Bacterioplankton Community Dynamics and Potentially Pathogenic Bacteria in Seawater around Jeju Island, South Korea, via Metabarcoding
por: Kim, Hyun-Jung, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_tp0eh6637dp5815ppoucuh0m85