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Towards standardized and reproducible research in skin microbiomes

Skin is a complex organ serving a critical role as a barrier and mediator of interactions between the human body and its environment. Recent studies have uncovered how resident microbial communities play a significant role in maintaining the normal healthy function of the skin and the immune system....

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Autores principales: Ruuskanen, Matti O., Vats, Deepti, Potbhare, Renuka, RaviKumar, Ameeta, Munukka, Eveliina, Ashma, Richa, Lahti, Leo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9790573/
https://www.ncbi.nlm.nih.gov/pubmed/35229437
http://dx.doi.org/10.1111/1462-2920.15945
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author Ruuskanen, Matti O.
Vats, Deepti
Potbhare, Renuka
RaviKumar, Ameeta
Munukka, Eveliina
Ashma, Richa
Lahti, Leo
author_facet Ruuskanen, Matti O.
Vats, Deepti
Potbhare, Renuka
RaviKumar, Ameeta
Munukka, Eveliina
Ashma, Richa
Lahti, Leo
author_sort Ruuskanen, Matti O.
collection PubMed
description Skin is a complex organ serving a critical role as a barrier and mediator of interactions between the human body and its environment. Recent studies have uncovered how resident microbial communities play a significant role in maintaining the normal healthy function of the skin and the immune system. In turn, numerous host‐associated and environmental factors influence these communities' composition and diversity across the cutaneous surface. In addition, specific compositional changes in skin microbiota have also been connected to the development of several chronic diseases. The current era of microbiome research is characterized by its reliance on large data sets of nucleotide sequences produced with high‐throughput sequencing of sample‐extracted DNA. These approaches have yielded new insights into many previously uncharacterized microbial communities. Application of standardized practices in the study of skin microbial communities could help us understand their complex structures, functional capacities, and health associations and increase the reproducibility of the research. Here, we overview the current research in human skin microbiomes and outline challenges specific to their study. Furthermore, we provide perspectives on recent advances in methods, analytical tools and applications of skin microbiomes in medicine and forensics.
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spelling pubmed-97905732022-12-28 Towards standardized and reproducible research in skin microbiomes Ruuskanen, Matti O. Vats, Deepti Potbhare, Renuka RaviKumar, Ameeta Munukka, Eveliina Ashma, Richa Lahti, Leo Environ Microbiol Special Issue on Microbiomes and Microbial Communities Skin is a complex organ serving a critical role as a barrier and mediator of interactions between the human body and its environment. Recent studies have uncovered how resident microbial communities play a significant role in maintaining the normal healthy function of the skin and the immune system. In turn, numerous host‐associated and environmental factors influence these communities' composition and diversity across the cutaneous surface. In addition, specific compositional changes in skin microbiota have also been connected to the development of several chronic diseases. The current era of microbiome research is characterized by its reliance on large data sets of nucleotide sequences produced with high‐throughput sequencing of sample‐extracted DNA. These approaches have yielded new insights into many previously uncharacterized microbial communities. Application of standardized practices in the study of skin microbial communities could help us understand their complex structures, functional capacities, and health associations and increase the reproducibility of the research. Here, we overview the current research in human skin microbiomes and outline challenges specific to their study. Furthermore, we provide perspectives on recent advances in methods, analytical tools and applications of skin microbiomes in medicine and forensics. John Wiley & Sons, Inc. 2022-03-07 2022-09 /pmc/articles/PMC9790573/ /pubmed/35229437 http://dx.doi.org/10.1111/1462-2920.15945 Text en © 2022 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Special Issue on Microbiomes and Microbial Communities
Ruuskanen, Matti O.
Vats, Deepti
Potbhare, Renuka
RaviKumar, Ameeta
Munukka, Eveliina
Ashma, Richa
Lahti, Leo
Towards standardized and reproducible research in skin microbiomes
title Towards standardized and reproducible research in skin microbiomes
title_full Towards standardized and reproducible research in skin microbiomes
title_fullStr Towards standardized and reproducible research in skin microbiomes
title_full_unstemmed Towards standardized and reproducible research in skin microbiomes
title_short Towards standardized and reproducible research in skin microbiomes
title_sort towards standardized and reproducible research in skin microbiomes
topic Special Issue on Microbiomes and Microbial Communities
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9790573/
https://www.ncbi.nlm.nih.gov/pubmed/35229437
http://dx.doi.org/10.1111/1462-2920.15945
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