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Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series

New materials with a low environmental load are expected to be generated through synthetic biology. To widely utilize this technology, it is important to create cells with designed biological functions and to control the expression of multiple enzymes. In this study, we constructed a cell-free evalu...

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Autores principales: Senda, Naoko, Enomoto, Toshihiko, Kihara, Kenta, Yamashiro, Naoki, Takagi, Naosato, Kiga, Daisuke, Nishida, Hirokazu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9791696/
https://www.ncbi.nlm.nih.gov/pubmed/36591595
http://dx.doi.org/10.1093/synbio/ysac029
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author Senda, Naoko
Enomoto, Toshihiko
Kihara, Kenta
Yamashiro, Naoki
Takagi, Naosato
Kiga, Daisuke
Nishida, Hirokazu
author_facet Senda, Naoko
Enomoto, Toshihiko
Kihara, Kenta
Yamashiro, Naoki
Takagi, Naosato
Kiga, Daisuke
Nishida, Hirokazu
author_sort Senda, Naoko
collection PubMed
description New materials with a low environmental load are expected to be generated through synthetic biology. To widely utilize this technology, it is important to create cells with designed biological functions and to control the expression of multiple enzymes. In this study, we constructed a cell-free evaluation system for multiple protein expression, in which synthesis is controlled by T7 promoter variants. The expression of a single protein using the T7 promoter variants showed the expected variety in expression levels, as previously reported. We then examined the expression levels of multiple proteins that are simultaneously produced in a single well to determine whether they can be predicted from the promoter activity values, which were defined from the isolated protein expression levels. When the sum of messenger ribonucleic acid (mRNA) species is small, the experimental protein expression levels can be predicted from the promoter activities (graphical abstract (a)) due to low competition for ribosomes. In other words, by using combinations of T7 promoter variants, we successfully developed a cell-free multiple protein synthesis system with tunable expression. In the presence of large amounts of mRNA, competition for ribosomes becomes an issue (graphical abstract (b)). Accordingly, the translation level of each protein cannot be directly predicted from the promoter activities and is biased by the strength of the ribosome binding site (RBS); a weaker RBS is more affected by competition. Our study provides information regarding the regulated expression of multiple enzymes in synthetic biology.
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spelling pubmed-97916962022-12-30 Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series Senda, Naoko Enomoto, Toshihiko Kihara, Kenta Yamashiro, Naoki Takagi, Naosato Kiga, Daisuke Nishida, Hirokazu Synth Biol (Oxf) Research Article New materials with a low environmental load are expected to be generated through synthetic biology. To widely utilize this technology, it is important to create cells with designed biological functions and to control the expression of multiple enzymes. In this study, we constructed a cell-free evaluation system for multiple protein expression, in which synthesis is controlled by T7 promoter variants. The expression of a single protein using the T7 promoter variants showed the expected variety in expression levels, as previously reported. We then examined the expression levels of multiple proteins that are simultaneously produced in a single well to determine whether they can be predicted from the promoter activity values, which were defined from the isolated protein expression levels. When the sum of messenger ribonucleic acid (mRNA) species is small, the experimental protein expression levels can be predicted from the promoter activities (graphical abstract (a)) due to low competition for ribosomes. In other words, by using combinations of T7 promoter variants, we successfully developed a cell-free multiple protein synthesis system with tunable expression. In the presence of large amounts of mRNA, competition for ribosomes becomes an issue (graphical abstract (b)). Accordingly, the translation level of each protein cannot be directly predicted from the promoter activities and is biased by the strength of the ribosome binding site (RBS); a weaker RBS is more affected by competition. Our study provides information regarding the regulated expression of multiple enzymes in synthetic biology. Oxford University Press 2022-11-25 /pmc/articles/PMC9791696/ /pubmed/36591595 http://dx.doi.org/10.1093/synbio/ysac029 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research Article
Senda, Naoko
Enomoto, Toshihiko
Kihara, Kenta
Yamashiro, Naoki
Takagi, Naosato
Kiga, Daisuke
Nishida, Hirokazu
Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title_full Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title_fullStr Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title_full_unstemmed Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title_short Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series
title_sort development of an expression-tunable multiple protein synthesis system in cell-free reactions using t7-promoter-variant series
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9791696/
https://www.ncbi.nlm.nih.gov/pubmed/36591595
http://dx.doi.org/10.1093/synbio/ysac029
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