Cargando…

Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning

In tasks involving the interpretation of medical images, suitably trained machine-learning models often exceed the performance of medical experts. Yet such a high-level of performance typically requires that the models be trained with relevant datasets that have been painstakingly annotated by exper...

Descripción completa

Detalles Bibliográficos
Autores principales: Tiu, Ekin, Talius, Ellie, Patel, Pujan, Langlotz, Curtis P., Ng, Andrew Y., Rajpurkar, Pranav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792370/
https://www.ncbi.nlm.nih.gov/pubmed/36109605
http://dx.doi.org/10.1038/s41551-022-00936-9
_version_ 1784859621382422528
author Tiu, Ekin
Talius, Ellie
Patel, Pujan
Langlotz, Curtis P.
Ng, Andrew Y.
Rajpurkar, Pranav
author_facet Tiu, Ekin
Talius, Ellie
Patel, Pujan
Langlotz, Curtis P.
Ng, Andrew Y.
Rajpurkar, Pranav
author_sort Tiu, Ekin
collection PubMed
description In tasks involving the interpretation of medical images, suitably trained machine-learning models often exceed the performance of medical experts. Yet such a high-level of performance typically requires that the models be trained with relevant datasets that have been painstakingly annotated by experts. Here we show that a self-supervised model trained on chest X-ray images that lack explicit annotations performs pathology-classification tasks with accuracies comparable to those of radiologists. On an external validation dataset of chest X-rays, the self-supervised model outperformed a fully supervised model in the detection of three pathologies (out of eight), and the performance generalized to pathologies that were not explicitly annotated for model training, to multiple image-interpretation tasks and to datasets from multiple institutions.
format Online
Article
Text
id pubmed-9792370
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-97923702022-12-28 Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning Tiu, Ekin Talius, Ellie Patel, Pujan Langlotz, Curtis P. Ng, Andrew Y. Rajpurkar, Pranav Nat Biomed Eng Article In tasks involving the interpretation of medical images, suitably trained machine-learning models often exceed the performance of medical experts. Yet such a high-level of performance typically requires that the models be trained with relevant datasets that have been painstakingly annotated by experts. Here we show that a self-supervised model trained on chest X-ray images that lack explicit annotations performs pathology-classification tasks with accuracies comparable to those of radiologists. On an external validation dataset of chest X-rays, the self-supervised model outperformed a fully supervised model in the detection of three pathologies (out of eight), and the performance generalized to pathologies that were not explicitly annotated for model training, to multiple image-interpretation tasks and to datasets from multiple institutions. Nature Publishing Group UK 2022-09-15 2022 /pmc/articles/PMC9792370/ /pubmed/36109605 http://dx.doi.org/10.1038/s41551-022-00936-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Tiu, Ekin
Talius, Ellie
Patel, Pujan
Langlotz, Curtis P.
Ng, Andrew Y.
Rajpurkar, Pranav
Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title_full Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title_fullStr Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title_full_unstemmed Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title_short Expert-level detection of pathologies from unannotated chest X-ray images via self-supervised learning
title_sort expert-level detection of pathologies from unannotated chest x-ray images via self-supervised learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792370/
https://www.ncbi.nlm.nih.gov/pubmed/36109605
http://dx.doi.org/10.1038/s41551-022-00936-9
work_keys_str_mv AT tiuekin expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning
AT taliusellie expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning
AT patelpujan expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning
AT langlotzcurtisp expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning
AT ngandrewy expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning
AT rajpurkarpranav expertleveldetectionofpathologiesfromunannotatedchestxrayimagesviaselfsupervisedlearning