Cargando…

Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach

In recent years, small molecule inhibition of LDHA (Lactate Dehydrogenase A) has evolved as an appealing option for anticancer therapy. LDHA catalyzes the interconversion of pyruvate and lactate in the glycolysis pathway to play a crucial role in aerobic glycolysis. Therefore, in the current investi...

Descripción completa

Detalles Bibliográficos
Autores principales: Ahmed, Sheikh Sunzid, Rahman, M. Oliur, Alqahtani, Ali S., Sultana, Nahid, Almarfadi, Omer M., Ali, M. Ajmal, Lee, Joongku
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792705/
https://www.ncbi.nlm.nih.gov/pubmed/36583135
http://dx.doi.org/10.1016/j.toxrep.2022.12.007
_version_ 1784859693301104640
author Ahmed, Sheikh Sunzid
Rahman, M. Oliur
Alqahtani, Ali S.
Sultana, Nahid
Almarfadi, Omer M.
Ali, M. Ajmal
Lee, Joongku
author_facet Ahmed, Sheikh Sunzid
Rahman, M. Oliur
Alqahtani, Ali S.
Sultana, Nahid
Almarfadi, Omer M.
Ali, M. Ajmal
Lee, Joongku
author_sort Ahmed, Sheikh Sunzid
collection PubMed
description In recent years, small molecule inhibition of LDHA (Lactate Dehydrogenase A) has evolved as an appealing option for anticancer therapy. LDHA catalyzes the interconversion of pyruvate and lactate in the glycolysis pathway to play a crucial role in aerobic glycolysis. Therefore, in the current investigation LDHA was targeted with bioactive phytochemicals of an ethnomedicinally important plant species Oroxylum indicum (L.) Kurz. A total of 52 phytochemicals were screened against LDHA protein through molecular docking, ADMET (Absorption, Distribution, Metabolism, Excretion and Toxicity) assay and molecular dynamics simulation to reveal three potential lead compounds such as Chrysin-7-O-glucuronide (−8.2 kcal/mol), Oroxindin (−8.1 kcal/mol) and Oroxin A (−8.0 kcal/mol). ADMET assay unveiled favorable pharmacokinetic, pharmacodynamic and toxicity properties for all the lead compounds. Molecular dynamics simulation exhibited significant conformational stability and compactness. MM/GBSA free binding energy calculations further corroborated the selection of top candidates where Oroxindin (−46.47 kcal/mol) was found to be better than Chrysin-7-O-glucuronide (−45.72 kcal/mol) and Oroxin A (−37.25 kcal/mol). Aldolase reductase and Xanthine dehydrogenase enzymes were found as potential drug targets and Esculin, the FDA approved drug was identified as structurally analogous to Oroxindin. These results could drive in establishing novel medications targeting LDHA to fight cancer.
format Online
Article
Text
id pubmed-9792705
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-97927052022-12-28 Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach Ahmed, Sheikh Sunzid Rahman, M. Oliur Alqahtani, Ali S. Sultana, Nahid Almarfadi, Omer M. Ali, M. Ajmal Lee, Joongku Toxicol Rep Article In recent years, small molecule inhibition of LDHA (Lactate Dehydrogenase A) has evolved as an appealing option for anticancer therapy. LDHA catalyzes the interconversion of pyruvate and lactate in the glycolysis pathway to play a crucial role in aerobic glycolysis. Therefore, in the current investigation LDHA was targeted with bioactive phytochemicals of an ethnomedicinally important plant species Oroxylum indicum (L.) Kurz. A total of 52 phytochemicals were screened against LDHA protein through molecular docking, ADMET (Absorption, Distribution, Metabolism, Excretion and Toxicity) assay and molecular dynamics simulation to reveal three potential lead compounds such as Chrysin-7-O-glucuronide (−8.2 kcal/mol), Oroxindin (−8.1 kcal/mol) and Oroxin A (−8.0 kcal/mol). ADMET assay unveiled favorable pharmacokinetic, pharmacodynamic and toxicity properties for all the lead compounds. Molecular dynamics simulation exhibited significant conformational stability and compactness. MM/GBSA free binding energy calculations further corroborated the selection of top candidates where Oroxindin (−46.47 kcal/mol) was found to be better than Chrysin-7-O-glucuronide (−45.72 kcal/mol) and Oroxin A (−37.25 kcal/mol). Aldolase reductase and Xanthine dehydrogenase enzymes were found as potential drug targets and Esculin, the FDA approved drug was identified as structurally analogous to Oroxindin. These results could drive in establishing novel medications targeting LDHA to fight cancer. Elsevier 2022-12-14 /pmc/articles/PMC9792705/ /pubmed/36583135 http://dx.doi.org/10.1016/j.toxrep.2022.12.007 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ahmed, Sheikh Sunzid
Rahman, M. Oliur
Alqahtani, Ali S.
Sultana, Nahid
Almarfadi, Omer M.
Ali, M. Ajmal
Lee, Joongku
Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title_full Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title_fullStr Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title_full_unstemmed Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title_short Anticancer potential of phytochemicals from Oroxylum indicum targeting Lactate Dehydrogenase A through bioinformatic approach
title_sort anticancer potential of phytochemicals from oroxylum indicum targeting lactate dehydrogenase a through bioinformatic approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792705/
https://www.ncbi.nlm.nih.gov/pubmed/36583135
http://dx.doi.org/10.1016/j.toxrep.2022.12.007
work_keys_str_mv AT ahmedsheikhsunzid anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT rahmanmoliur anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT alqahtanialis anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT sultananahid anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT almarfadiomerm anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT alimajmal anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach
AT leejoongku anticancerpotentialofphytochemicalsfromoroxylumindicumtargetinglactatedehydrogenaseathroughbioinformaticapproach