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Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning
PURPOSE: To implement two Artificial Intelligence (AI) methods, radiomics and deep learning, to build diagnostic models for patients presenting with architectural distortion on Digital Breast Tomosynthesis (DBT) images. MATERIALS AND METHODS: A total of 298 patients were identified from a retrospect...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792864/ https://www.ncbi.nlm.nih.gov/pubmed/36582788 http://dx.doi.org/10.3389/fonc.2022.991892 |
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author | Chen, Xiao Zhang, Yang Zhou, Jiahuan Wang, Xiao Liu, Xinmiao Nie, Ke Lin, Xiaomin He, Wenwen Su, Min-Ying Cao, Guoquan Wang, Meihao |
author_facet | Chen, Xiao Zhang, Yang Zhou, Jiahuan Wang, Xiao Liu, Xinmiao Nie, Ke Lin, Xiaomin He, Wenwen Su, Min-Ying Cao, Guoquan Wang, Meihao |
author_sort | Chen, Xiao |
collection | PubMed |
description | PURPOSE: To implement two Artificial Intelligence (AI) methods, radiomics and deep learning, to build diagnostic models for patients presenting with architectural distortion on Digital Breast Tomosynthesis (DBT) images. MATERIALS AND METHODS: A total of 298 patients were identified from a retrospective review, and all of them had confirmed pathological diagnoses, 175 malignant and 123 benign. The BI-RADS scores of DBT were obtained from the radiology reports, classified into 2, 3, 4A, 4B, 4C, and 5. The architectural distortion areas on craniocaudal (CC) and mediolateral oblique (MLO) views were manually outlined as the region of interest (ROI) for the radiomics analysis. Features were extracted using PyRadiomics, and then the support vector machine (SVM) was applied to select important features and build the classification model. Deep learning was performed using the ResNet50 algorithm, with the binary output of malignancy and benignity. The Gradient-weighted Class Activation Mapping (Grad-CAM) method was utilized to localize the suspicious areas. The predicted malignancy probability was used to construct the ROC curves, compared by the DeLong test. The binary diagnosis was made using the threshold of ≥ 0.5 as malignant. RESULTS: The majority of malignant lesions had BI-RADS scores of 4B, 4C, and 5 (148/175 = 84.6%). In the benign group, a substantial number of patients also had high BI-RADS ≥ 4B (56/123 = 45.5%), and the majority had BI-RADS ≥ 4A (102/123 = 82.9%). The radiomics model built using the combined CC+MLO features yielded an area under curve (AUC) of 0.82, the sensitivity of 0.78, specificity of 0.68, and accuracy of 0.74. If only features from CC were used, the AUC was 0.77, and if only features from MLO were used, the AUC was 0.72. The deep-learning model yielded an AUC of 0.61, significantly lower than all radiomics models (p<0.01), which was presumably due to the use of the entire image as input. The Grad-CAM could localize the architectural distortion areas. CONCLUSION: The radiomics model can achieve a satisfactory diagnostic accuracy, and the high specificity in the benign group can be used to avoid unnecessary biopsies. Deep learning can be used to localize the architectural distortion areas, which may provide an automatic method for ROI delineation to facilitate the development of a fully-automatic computer-aided diagnosis system using combined AI strategies. |
format | Online Article Text |
id | pubmed-9792864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97928642022-12-28 Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning Chen, Xiao Zhang, Yang Zhou, Jiahuan Wang, Xiao Liu, Xinmiao Nie, Ke Lin, Xiaomin He, Wenwen Su, Min-Ying Cao, Guoquan Wang, Meihao Front Oncol Oncology PURPOSE: To implement two Artificial Intelligence (AI) methods, radiomics and deep learning, to build diagnostic models for patients presenting with architectural distortion on Digital Breast Tomosynthesis (DBT) images. MATERIALS AND METHODS: A total of 298 patients were identified from a retrospective review, and all of them had confirmed pathological diagnoses, 175 malignant and 123 benign. The BI-RADS scores of DBT were obtained from the radiology reports, classified into 2, 3, 4A, 4B, 4C, and 5. The architectural distortion areas on craniocaudal (CC) and mediolateral oblique (MLO) views were manually outlined as the region of interest (ROI) for the radiomics analysis. Features were extracted using PyRadiomics, and then the support vector machine (SVM) was applied to select important features and build the classification model. Deep learning was performed using the ResNet50 algorithm, with the binary output of malignancy and benignity. The Gradient-weighted Class Activation Mapping (Grad-CAM) method was utilized to localize the suspicious areas. The predicted malignancy probability was used to construct the ROC curves, compared by the DeLong test. The binary diagnosis was made using the threshold of ≥ 0.5 as malignant. RESULTS: The majority of malignant lesions had BI-RADS scores of 4B, 4C, and 5 (148/175 = 84.6%). In the benign group, a substantial number of patients also had high BI-RADS ≥ 4B (56/123 = 45.5%), and the majority had BI-RADS ≥ 4A (102/123 = 82.9%). The radiomics model built using the combined CC+MLO features yielded an area under curve (AUC) of 0.82, the sensitivity of 0.78, specificity of 0.68, and accuracy of 0.74. If only features from CC were used, the AUC was 0.77, and if only features from MLO were used, the AUC was 0.72. The deep-learning model yielded an AUC of 0.61, significantly lower than all radiomics models (p<0.01), which was presumably due to the use of the entire image as input. The Grad-CAM could localize the architectural distortion areas. CONCLUSION: The radiomics model can achieve a satisfactory diagnostic accuracy, and the high specificity in the benign group can be used to avoid unnecessary biopsies. Deep learning can be used to localize the architectural distortion areas, which may provide an automatic method for ROI delineation to facilitate the development of a fully-automatic computer-aided diagnosis system using combined AI strategies. Frontiers Media S.A. 2022-12-13 /pmc/articles/PMC9792864/ /pubmed/36582788 http://dx.doi.org/10.3389/fonc.2022.991892 Text en Copyright © 2022 Chen, Zhang, Zhou, Wang, Liu, Nie, Lin, He, Su, Cao and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Chen, Xiao Zhang, Yang Zhou, Jiahuan Wang, Xiao Liu, Xinmiao Nie, Ke Lin, Xiaomin He, Wenwen Su, Min-Ying Cao, Guoquan Wang, Meihao Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title | Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title_full | Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title_fullStr | Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title_full_unstemmed | Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title_short | Diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
title_sort | diagnosis of architectural distortion on digital breast tomosynthesis using radiomics and deep learning |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9792864/ https://www.ncbi.nlm.nih.gov/pubmed/36582788 http://dx.doi.org/10.3389/fonc.2022.991892 |
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