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Characterization and Expression Analysis of B12D-Like Gene From Pearl Millet
B12D-Like is a member of the B12D domain-containing protein family, which includes several transmembrane proteins in plants. In this study, the cDNA of PgB12D-Like from Pennisetum glaucum subsp. monodii (Maire) Brunken was sequenced and characterized. The 446-bp cDNA for PgB12D-Like encodes for a de...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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SAGE Publications
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9793006/ https://www.ncbi.nlm.nih.gov/pubmed/36582514 http://dx.doi.org/10.1177/11769343221142285 |
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author | Almutairi, Zainab M |
author_facet | Almutairi, Zainab M |
author_sort | Almutairi, Zainab M |
collection | PubMed |
description | B12D-Like is a member of the B12D domain-containing protein family, which includes several transmembrane proteins in plants. In this study, the cDNA of PgB12D-Like from Pennisetum glaucum subsp. monodii (Maire) Brunken was sequenced and characterized. The 446-bp cDNA for PgB12D-Like encodes for a deduced protein of 95 amino acids. The PgB12D-Like protein contains a B12D domain and a transmembrane helix embedded in the mitochondrial membrane. Cis-regulatory elements analysis reveals binding sites for various transcription factors involved in responses to stress, light, and plant hormones in the putative promoter sequence for PgB12D-Like. Several proteins involved in floral organ development were also found to have binding sites in the PgB12D-Like promoter, such as agamous-like proteins and squamosa promoter binding proteins. Real-time PCR reveals high expression of PgB12D-Like in flowers during heading, whereas its expression in a 4-day-old seedling shoot was the lowest. Moreover, cold, drought, and heat stress were found to upregulate PgB12D-Like, whereas gibberellic acid downregulated its expression in seedlings. The present study helps to uncover the function of the B12D-Like in response to plant hormones and abiotic stress during P. glaucum development. |
format | Online Article Text |
id | pubmed-9793006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-97930062022-12-28 Characterization and Expression Analysis of B12D-Like Gene From Pearl Millet Almutairi, Zainab M Evol Bioinform Online Original Research B12D-Like is a member of the B12D domain-containing protein family, which includes several transmembrane proteins in plants. In this study, the cDNA of PgB12D-Like from Pennisetum glaucum subsp. monodii (Maire) Brunken was sequenced and characterized. The 446-bp cDNA for PgB12D-Like encodes for a deduced protein of 95 amino acids. The PgB12D-Like protein contains a B12D domain and a transmembrane helix embedded in the mitochondrial membrane. Cis-regulatory elements analysis reveals binding sites for various transcription factors involved in responses to stress, light, and plant hormones in the putative promoter sequence for PgB12D-Like. Several proteins involved in floral organ development were also found to have binding sites in the PgB12D-Like promoter, such as agamous-like proteins and squamosa promoter binding proteins. Real-time PCR reveals high expression of PgB12D-Like in flowers during heading, whereas its expression in a 4-day-old seedling shoot was the lowest. Moreover, cold, drought, and heat stress were found to upregulate PgB12D-Like, whereas gibberellic acid downregulated its expression in seedlings. The present study helps to uncover the function of the B12D-Like in response to plant hormones and abiotic stress during P. glaucum development. SAGE Publications 2022-12-22 /pmc/articles/PMC9793006/ /pubmed/36582514 http://dx.doi.org/10.1177/11769343221142285 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page(https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Almutairi, Zainab M Characterization and Expression Analysis of B12D-Like Gene From Pearl Millet |
title | Characterization and Expression Analysis of
B12D-Like Gene From Pearl Millet |
title_full | Characterization and Expression Analysis of
B12D-Like Gene From Pearl Millet |
title_fullStr | Characterization and Expression Analysis of
B12D-Like Gene From Pearl Millet |
title_full_unstemmed | Characterization and Expression Analysis of
B12D-Like Gene From Pearl Millet |
title_short | Characterization and Expression Analysis of
B12D-Like Gene From Pearl Millet |
title_sort | characterization and expression analysis of
b12d-like gene from pearl millet |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9793006/ https://www.ncbi.nlm.nih.gov/pubmed/36582514 http://dx.doi.org/10.1177/11769343221142285 |
work_keys_str_mv | AT almutairizainabm characterizationandexpressionanalysisofb12dlikegenefrompearlmillet |