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The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology

β(2)‐Microglobulin (β2m) forms amyloid fibrils in vitro under acidic conditions. Under these conditions, the residual structure of acid‐denatured β2m is relevant to seeding and fibril extension processes. Disulfide (SS) bond‐oxidized β2m has been shown to form rigid, ordered fibrils, whereas SS bond...

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Autores principales: Tomiyama, Ryosuke, So, Masatomo, Yamaguchi, Keiichi, Miyanoiri, Yohei, Sakurai, Kazumasa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9793977/
https://www.ncbi.nlm.nih.gov/pubmed/36321362
http://dx.doi.org/10.1002/pro.4487
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author Tomiyama, Ryosuke
So, Masatomo
Yamaguchi, Keiichi
Miyanoiri, Yohei
Sakurai, Kazumasa
author_facet Tomiyama, Ryosuke
So, Masatomo
Yamaguchi, Keiichi
Miyanoiri, Yohei
Sakurai, Kazumasa
author_sort Tomiyama, Ryosuke
collection PubMed
description β(2)‐Microglobulin (β2m) forms amyloid fibrils in vitro under acidic conditions. Under these conditions, the residual structure of acid‐denatured β2m is relevant to seeding and fibril extension processes. Disulfide (SS) bond‐oxidized β2m has been shown to form rigid, ordered fibrils, whereas SS bond‐reduced β2m forms curvy, less‐ordered fibrils. These findings suggest that the presence of an SS bond affects the residual structure of the monomer, which subsequently influences the fibril morphology. To clarify this process, we herein performed NMR experiments. The results obtained revealed that oxidized β2m contained a residual structure throughout the molecule, including the N‐ and C‐termini, whereas the residual structure of the reduced form was localized and other regions had a random coil structure. The range of the residual structure in the oxidized form was wider than that of the fibril core. These results indicate that acid‐denatured β2m has variable conformations. Most conformations in the ensemble cannot participate in fibril formation because their core residues are hidden by residual structures. However, when hydrophobic residues are exposed, polypeptides competently form an ordered fibril. This conformational selection phase may be needed for the ordered assembly of amyloid fibrils.
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spelling pubmed-97939772023-01-01 The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology Tomiyama, Ryosuke So, Masatomo Yamaguchi, Keiichi Miyanoiri, Yohei Sakurai, Kazumasa Protein Sci Full‐length Papers β(2)‐Microglobulin (β2m) forms amyloid fibrils in vitro under acidic conditions. Under these conditions, the residual structure of acid‐denatured β2m is relevant to seeding and fibril extension processes. Disulfide (SS) bond‐oxidized β2m has been shown to form rigid, ordered fibrils, whereas SS bond‐reduced β2m forms curvy, less‐ordered fibrils. These findings suggest that the presence of an SS bond affects the residual structure of the monomer, which subsequently influences the fibril morphology. To clarify this process, we herein performed NMR experiments. The results obtained revealed that oxidized β2m contained a residual structure throughout the molecule, including the N‐ and C‐termini, whereas the residual structure of the reduced form was localized and other regions had a random coil structure. The range of the residual structure in the oxidized form was wider than that of the fibril core. These results indicate that acid‐denatured β2m has variable conformations. Most conformations in the ensemble cannot participate in fibril formation because their core residues are hidden by residual structures. However, when hydrophobic residues are exposed, polypeptides competently form an ordered fibril. This conformational selection phase may be needed for the ordered assembly of amyloid fibrils. John Wiley & Sons, Inc. 2023-01-01 /pmc/articles/PMC9793977/ /pubmed/36321362 http://dx.doi.org/10.1002/pro.4487 Text en © 2022 The Authors. Protein Science published by Wiley Periodicals LLC on behalf of The Protein Society. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full‐length Papers
Tomiyama, Ryosuke
So, Masatomo
Yamaguchi, Keiichi
Miyanoiri, Yohei
Sakurai, Kazumasa
The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title_full The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title_fullStr The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title_full_unstemmed The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title_short The residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
title_sort residual structure of acid‐denatured β(2)‐microglobulin is relevant to an ordered fibril morphology
topic Full‐length Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9793977/
https://www.ncbi.nlm.nih.gov/pubmed/36321362
http://dx.doi.org/10.1002/pro.4487
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