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Semi‐supervised classification of fundus images combined with CNN and GCN

PURPOSE: Diabetic retinopathy (DR) is one of the most serious complications of diabetes, which is a kind of fundus lesion with specific changes. Early diagnosis of DR can effectively reduce the visual damage caused by DR. Due to the variety and different morphology of DR lesions, automatic classific...

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Autores principales: Duan, Sixu, Huang, Pu, Chen, Min, Wang, Ting, Sun, Xiaolei, Chen, Meirong, Dong, Xueyuan, Jiang, Zekun, Li, Dengwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797168/
https://www.ncbi.nlm.nih.gov/pubmed/35946866
http://dx.doi.org/10.1002/acm2.13746
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author Duan, Sixu
Huang, Pu
Chen, Min
Wang, Ting
Sun, Xiaolei
Chen, Meirong
Dong, Xueyuan
Jiang, Zekun
Li, Dengwang
author_facet Duan, Sixu
Huang, Pu
Chen, Min
Wang, Ting
Sun, Xiaolei
Chen, Meirong
Dong, Xueyuan
Jiang, Zekun
Li, Dengwang
author_sort Duan, Sixu
collection PubMed
description PURPOSE: Diabetic retinopathy (DR) is one of the most serious complications of diabetes, which is a kind of fundus lesion with specific changes. Early diagnosis of DR can effectively reduce the visual damage caused by DR. Due to the variety and different morphology of DR lesions, automatic classification of fundus images in mass screening can greatly save clinicians' diagnosis time. To alleviate these problems, in this paper, we propose a novel framework—graph attentional convolutional neural network (GACNN). METHODS AND MATERIALS: The network consists of convolutional neural network (CNN) and graph convolutional network (GCN). The global and spatial features of fundus images are extracted by using CNN and GCN, and attention mechanism is introduced to enhance the adaptability of GCN to topology map. We adopt semi‐supervised method for classification, which greatly improves the generalization ability of the network. RESULTS: In order to verify the effectiveness of the network, we conducted comparative experiments and ablation experiments. We use confusion matrix, precision, recall, kappa score, and accuracy as evaluation indexes. With the increase of the labeling rates, the classification accuracy is higher. Particularly, when the labeling rate is set to 100%, the classification accuracy of GACNN reaches 93.35%. Compared with DenseNet121, the accuracy rate is improved by 6.24%. CONCLUSIONS: Semi‐supervised classification based on attention mechanism can effectively improve the classification performance of the model, and attain preferable results in classification indexes such as accuracy and recall. GACNN provides a feasible classification scheme for fundus images, which effectively reduces the screening human resources.
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spelling pubmed-97971682022-12-30 Semi‐supervised classification of fundus images combined with CNN and GCN Duan, Sixu Huang, Pu Chen, Min Wang, Ting Sun, Xiaolei Chen, Meirong Dong, Xueyuan Jiang, Zekun Li, Dengwang J Appl Clin Med Phys Medical Imaging PURPOSE: Diabetic retinopathy (DR) is one of the most serious complications of diabetes, which is a kind of fundus lesion with specific changes. Early diagnosis of DR can effectively reduce the visual damage caused by DR. Due to the variety and different morphology of DR lesions, automatic classification of fundus images in mass screening can greatly save clinicians' diagnosis time. To alleviate these problems, in this paper, we propose a novel framework—graph attentional convolutional neural network (GACNN). METHODS AND MATERIALS: The network consists of convolutional neural network (CNN) and graph convolutional network (GCN). The global and spatial features of fundus images are extracted by using CNN and GCN, and attention mechanism is introduced to enhance the adaptability of GCN to topology map. We adopt semi‐supervised method for classification, which greatly improves the generalization ability of the network. RESULTS: In order to verify the effectiveness of the network, we conducted comparative experiments and ablation experiments. We use confusion matrix, precision, recall, kappa score, and accuracy as evaluation indexes. With the increase of the labeling rates, the classification accuracy is higher. Particularly, when the labeling rate is set to 100%, the classification accuracy of GACNN reaches 93.35%. Compared with DenseNet121, the accuracy rate is improved by 6.24%. CONCLUSIONS: Semi‐supervised classification based on attention mechanism can effectively improve the classification performance of the model, and attain preferable results in classification indexes such as accuracy and recall. GACNN provides a feasible classification scheme for fundus images, which effectively reduces the screening human resources. John Wiley and Sons Inc. 2022-08-10 /pmc/articles/PMC9797168/ /pubmed/35946866 http://dx.doi.org/10.1002/acm2.13746 Text en © 2022 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Medical Imaging
Duan, Sixu
Huang, Pu
Chen, Min
Wang, Ting
Sun, Xiaolei
Chen, Meirong
Dong, Xueyuan
Jiang, Zekun
Li, Dengwang
Semi‐supervised classification of fundus images combined with CNN and GCN
title Semi‐supervised classification of fundus images combined with CNN and GCN
title_full Semi‐supervised classification of fundus images combined with CNN and GCN
title_fullStr Semi‐supervised classification of fundus images combined with CNN and GCN
title_full_unstemmed Semi‐supervised classification of fundus images combined with CNN and GCN
title_short Semi‐supervised classification of fundus images combined with CNN and GCN
title_sort semi‐supervised classification of fundus images combined with cnn and gcn
topic Medical Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797168/
https://www.ncbi.nlm.nih.gov/pubmed/35946866
http://dx.doi.org/10.1002/acm2.13746
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