Cargando…
Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Atatürk University School of Medicine
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797774/ https://www.ncbi.nlm.nih.gov/pubmed/35943079 http://dx.doi.org/10.5152/eurasianjmed.2022.22096 |
_version_ | 1784860755771785216 |
---|---|
author | Koç, Ural Akçapınar Sezer, Ebru Özkaya, Yaşar Alper Yarbay, Yasin Taydaş, Onur Ayyıldız, Veysel Atilla Alper Kızıloğlu, Hüseyin Kesimal, Uğur Çankaya, İmran Said Beşler, Muhammed Karakaş, Emrah Karademir, Fatih Sebik, Nihat Barış Bahadır, Murat Sezer, Özgür Yeşilyurt, Batuhan Varlı, Songul Akdoğan, Erhan Mahir Ülgü, Mustafa Birinci, Şuayip |
author_facet | Koç, Ural Akçapınar Sezer, Ebru Özkaya, Yaşar Alper Yarbay, Yasin Taydaş, Onur Ayyıldız, Veysel Atilla Alper Kızıloğlu, Hüseyin Kesimal, Uğur Çankaya, İmran Said Beşler, Muhammed Karakaş, Emrah Karademir, Fatih Sebik, Nihat Barış Bahadır, Murat Sezer, Özgür Yeşilyurt, Batuhan Varlı, Songul Akdoğan, Erhan Mahir Ülgü, Mustafa Birinci, Şuayip |
author_sort | Koç, Ural |
collection | PubMed |
description | OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the anonymized and annotated data set is also provided via official website for further research. MATERIALS AND METHODS: Data set recorded over the period covering 2019 and 2020 were centrally screened from the e-Pulse and Teleradiology System of the Republic of Türkiye, Ministry of Health using various codes and filtering criteria. The data set was anonymized. The data set was prepared, pooled, curated, and annotated by 7 radiologists. The training data set was shared with the teams via a dedicated file transfer protocol server, which could be accessed using private usernames and passwords given to the teams under a non-disclosure agreement signed by the representative of each team. RESULTS: The competition consisted of 2 stages. In the first stage, teams were given 192 digital imaging and communications in medicine images that belong to 1 of 3 possible categories namely, hemorrhage, ischemic, or non-stroke. Teams were asked to classify each image as either stroke present or absent. In the second stage of the competition, qualifying 36 teams were given 97 digital imaging and communications in medicine images that contained hemorrhage, ischemia, or both lesions. Among the employed methods, Unet and DeepLabv3 were the most frequently observed ones. CONCLUSION: Artificial intelligence competitions in healthcare offer good opportunities to collect data reflecting various cases and problems. Especially, annotated data set by domain experts is more valuable. |
format | Online Article Text |
id | pubmed-9797774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Atatürk University School of Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-97977742023-01-03 Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set Koç, Ural Akçapınar Sezer, Ebru Özkaya, Yaşar Alper Yarbay, Yasin Taydaş, Onur Ayyıldız, Veysel Atilla Alper Kızıloğlu, Hüseyin Kesimal, Uğur Çankaya, İmran Said Beşler, Muhammed Karakaş, Emrah Karademir, Fatih Sebik, Nihat Barış Bahadır, Murat Sezer, Özgür Yeşilyurt, Batuhan Varlı, Songul Akdoğan, Erhan Mahir Ülgü, Mustafa Birinci, Şuayip Eurasian J Med Original Article OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the anonymized and annotated data set is also provided via official website for further research. MATERIALS AND METHODS: Data set recorded over the period covering 2019 and 2020 were centrally screened from the e-Pulse and Teleradiology System of the Republic of Türkiye, Ministry of Health using various codes and filtering criteria. The data set was anonymized. The data set was prepared, pooled, curated, and annotated by 7 radiologists. The training data set was shared with the teams via a dedicated file transfer protocol server, which could be accessed using private usernames and passwords given to the teams under a non-disclosure agreement signed by the representative of each team. RESULTS: The competition consisted of 2 stages. In the first stage, teams were given 192 digital imaging and communications in medicine images that belong to 1 of 3 possible categories namely, hemorrhage, ischemic, or non-stroke. Teams were asked to classify each image as either stroke present or absent. In the second stage of the competition, qualifying 36 teams were given 97 digital imaging and communications in medicine images that contained hemorrhage, ischemia, or both lesions. Among the employed methods, Unet and DeepLabv3 were the most frequently observed ones. CONCLUSION: Artificial intelligence competitions in healthcare offer good opportunities to collect data reflecting various cases and problems. Especially, annotated data set by domain experts is more valuable. Atatürk University School of Medicine 2022-10-01 /pmc/articles/PMC9797774/ /pubmed/35943079 http://dx.doi.org/10.5152/eurasianjmed.2022.22096 Text en © Copyright 2022 authors https://creativecommons.org/licenses/by/4.0/ Content of this journal is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | Original Article Koç, Ural Akçapınar Sezer, Ebru Özkaya, Yaşar Alper Yarbay, Yasin Taydaş, Onur Ayyıldız, Veysel Atilla Alper Kızıloğlu, Hüseyin Kesimal, Uğur Çankaya, İmran Said Beşler, Muhammed Karakaş, Emrah Karademir, Fatih Sebik, Nihat Barış Bahadır, Murat Sezer, Özgür Yeşilyurt, Batuhan Varlı, Songul Akdoğan, Erhan Mahir Ülgü, Mustafa Birinci, Şuayip Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title | Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title_full | Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title_fullStr | Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title_full_unstemmed | Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title_short | Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set |
title_sort | artificial intelligence in healthcare competition (teknofest-2021): stroke data set |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797774/ https://www.ncbi.nlm.nih.gov/pubmed/35943079 http://dx.doi.org/10.5152/eurasianjmed.2022.22096 |
work_keys_str_mv | AT kocural artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT akcapınarsezerebru artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT ozkayayasaralper artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT yarbayyasin artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT taydasonur artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT ayyıldızveyselatilla artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT alperkızılogluhuseyin artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT kesimalugur artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT cankayaimran artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT saidbeslermuhammed artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT karakasemrah artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT karademirfatih artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT sebiknihatbarıs artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT bahadırmurat artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT sezerozgur artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT yesilyurtbatuhan artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT varlısongul artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT akdoganerhan artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT mahirulgumustafa artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset AT birincisuayip artificialintelligenceinhealthcarecompetitionteknofest2021strokedataset |