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Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set

OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the...

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Autores principales: Koç, Ural, Akçapınar Sezer, Ebru, Özkaya, Yaşar Alper, Yarbay, Yasin, Taydaş, Onur, Ayyıldız, Veysel Atilla, Alper Kızıloğlu, Hüseyin, Kesimal, Uğur, Çankaya, İmran, Said Beşler, Muhammed, Karakaş, Emrah, Karademir, Fatih, Sebik, Nihat Barış, Bahadır, Murat, Sezer, Özgür, Yeşilyurt, Batuhan, Varlı, Songul, Akdoğan, Erhan, Mahir Ülgü, Mustafa, Birinci, Şuayip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Atatürk University School of Medicine 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797774/
https://www.ncbi.nlm.nih.gov/pubmed/35943079
http://dx.doi.org/10.5152/eurasianjmed.2022.22096
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author Koç, Ural
Akçapınar Sezer, Ebru
Özkaya, Yaşar Alper
Yarbay, Yasin
Taydaş, Onur
Ayyıldız, Veysel Atilla
Alper Kızıloğlu, Hüseyin
Kesimal, Uğur
Çankaya, İmran
Said Beşler, Muhammed
Karakaş, Emrah
Karademir, Fatih
Sebik, Nihat Barış
Bahadır, Murat
Sezer, Özgür
Yeşilyurt, Batuhan
Varlı, Songul
Akdoğan, Erhan
Mahir Ülgü, Mustafa
Birinci, Şuayip
author_facet Koç, Ural
Akçapınar Sezer, Ebru
Özkaya, Yaşar Alper
Yarbay, Yasin
Taydaş, Onur
Ayyıldız, Veysel Atilla
Alper Kızıloğlu, Hüseyin
Kesimal, Uğur
Çankaya, İmran
Said Beşler, Muhammed
Karakaş, Emrah
Karademir, Fatih
Sebik, Nihat Barış
Bahadır, Murat
Sezer, Özgür
Yeşilyurt, Batuhan
Varlı, Songul
Akdoğan, Erhan
Mahir Ülgü, Mustafa
Birinci, Şuayip
author_sort Koç, Ural
collection PubMed
description OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the anonymized and annotated data set is also provided via official website for further research. MATERIALS AND METHODS: Data set recorded over the period covering 2019 and 2020 were centrally screened from the e-Pulse and Teleradiology System of the Republic of Türkiye, Ministry of Health using various codes and filtering criteria. The data set was anonymized. The data set was prepared, pooled, curated, and annotated by 7 radiologists. The training data set was shared with the teams via a dedicated file transfer protocol server, which could be accessed using private usernames and passwords given to the teams under a non-disclosure agreement signed by the representative of each team. RESULTS: The competition consisted of 2 stages. In the first stage, teams were given 192 digital imaging and communications in medicine images that belong to 1 of 3 possible categories namely, hemorrhage, ischemic, or non-stroke. Teams were asked to classify each image as either stroke present or absent. In the second stage of the competition, qualifying 36 teams were given 97 digital imaging and communications in medicine images that contained hemorrhage, ischemia, or both lesions. Among the employed methods, Unet and DeepLabv3 were the most frequently observed ones. CONCLUSION: Artificial intelligence competitions in healthcare offer good opportunities to collect data reflecting various cases and problems. Especially, annotated data set by domain experts is more valuable.
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spelling pubmed-97977742023-01-03 Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set Koç, Ural Akçapınar Sezer, Ebru Özkaya, Yaşar Alper Yarbay, Yasin Taydaş, Onur Ayyıldız, Veysel Atilla Alper Kızıloğlu, Hüseyin Kesimal, Uğur Çankaya, İmran Said Beşler, Muhammed Karakaş, Emrah Karademir, Fatih Sebik, Nihat Barış Bahadır, Murat Sezer, Özgür Yeşilyurt, Batuhan Varlı, Songul Akdoğan, Erhan Mahir Ülgü, Mustafa Birinci, Şuayip Eurasian J Med Original Article OBJECTIVE: The artificial intelligence competition in healthcare was organized for the first time at the annual aviation, space, and technology festival (TEKNOFEST), Istanbul/Türkiye, in September 2021. In this article, the data set preparation and competition processes were explained in detail; the anonymized and annotated data set is also provided via official website for further research. MATERIALS AND METHODS: Data set recorded over the period covering 2019 and 2020 were centrally screened from the e-Pulse and Teleradiology System of the Republic of Türkiye, Ministry of Health using various codes and filtering criteria. The data set was anonymized. The data set was prepared, pooled, curated, and annotated by 7 radiologists. The training data set was shared with the teams via a dedicated file transfer protocol server, which could be accessed using private usernames and passwords given to the teams under a non-disclosure agreement signed by the representative of each team. RESULTS: The competition consisted of 2 stages. In the first stage, teams were given 192 digital imaging and communications in medicine images that belong to 1 of 3 possible categories namely, hemorrhage, ischemic, or non-stroke. Teams were asked to classify each image as either stroke present or absent. In the second stage of the competition, qualifying 36 teams were given 97 digital imaging and communications in medicine images that contained hemorrhage, ischemia, or both lesions. Among the employed methods, Unet and DeepLabv3 were the most frequently observed ones. CONCLUSION: Artificial intelligence competitions in healthcare offer good opportunities to collect data reflecting various cases and problems. Especially, annotated data set by domain experts is more valuable. Atatürk University School of Medicine 2022-10-01 /pmc/articles/PMC9797774/ /pubmed/35943079 http://dx.doi.org/10.5152/eurasianjmed.2022.22096 Text en © Copyright 2022 authors https://creativecommons.org/licenses/by/4.0/ Content of this journal is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Original Article
Koç, Ural
Akçapınar Sezer, Ebru
Özkaya, Yaşar Alper
Yarbay, Yasin
Taydaş, Onur
Ayyıldız, Veysel Atilla
Alper Kızıloğlu, Hüseyin
Kesimal, Uğur
Çankaya, İmran
Said Beşler, Muhammed
Karakaş, Emrah
Karademir, Fatih
Sebik, Nihat Barış
Bahadır, Murat
Sezer, Özgür
Yeşilyurt, Batuhan
Varlı, Songul
Akdoğan, Erhan
Mahir Ülgü, Mustafa
Birinci, Şuayip
Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title_full Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title_fullStr Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title_full_unstemmed Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title_short Artificial Intelligence in Healthcare Competition (Teknofest-2021): Stroke Data Set
title_sort artificial intelligence in healthcare competition (teknofest-2021): stroke data set
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9797774/
https://www.ncbi.nlm.nih.gov/pubmed/35943079
http://dx.doi.org/10.5152/eurasianjmed.2022.22096
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