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Evaluation of loop-mediated isothermal amplification for detecting COVID-19
The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Author(s). Published by Elsevier Ltd.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9798669/ https://www.ncbi.nlm.nih.gov/pubmed/36594046 http://dx.doi.org/10.1016/j.jcvp.2022.100132 |
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author | Giantini, Astuti Suhaeri, Muhammad Kusumaningrum, Ardiana Prasetyo, Dimas Seto Sahar, Windy Hidayat, Rakhmad Putra, Muhammad Arza Hermawan |
author_facet | Giantini, Astuti Suhaeri, Muhammad Kusumaningrum, Ardiana Prasetyo, Dimas Seto Sahar, Windy Hidayat, Rakhmad Putra, Muhammad Arza Hermawan |
author_sort | Giantini, Astuti |
collection | PubMed |
description | The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument and trained personnel may hinder its application, especially in remote and facility-lacking areas. Reverse transcription loop-mediated isothermal amplification (RT-LAMP) may serve as a potential approach for detection of SARS-CoV-2 as the resources needed in its application is far less complex than those of qRT-PCR. Herein, we evaluated RT-LAMP based analytical method (COVIDNow), relative to qRT-PCR, in detecting SARS-CoV-2 by using 63 clinical respiratory samples. Based on our finding, COVIDNow exhibited sensitivity and specificity values of 87.5% and 80.6%, respectively. Taken together, RT-LAMP based detection of SARS-CoV-2 by utilizing COVIDNow might serves as a valuable diagnostic tool in the management of global COVID-19 pandemic condition. |
format | Online Article Text |
id | pubmed-9798669 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Author(s). Published by Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-97986692022-12-29 Evaluation of loop-mediated isothermal amplification for detecting COVID-19 Giantini, Astuti Suhaeri, Muhammad Kusumaningrum, Ardiana Prasetyo, Dimas Seto Sahar, Windy Hidayat, Rakhmad Putra, Muhammad Arza Hermawan J Clin Virol Plus Article The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument and trained personnel may hinder its application, especially in remote and facility-lacking areas. Reverse transcription loop-mediated isothermal amplification (RT-LAMP) may serve as a potential approach for detection of SARS-CoV-2 as the resources needed in its application is far less complex than those of qRT-PCR. Herein, we evaluated RT-LAMP based analytical method (COVIDNow), relative to qRT-PCR, in detecting SARS-CoV-2 by using 63 clinical respiratory samples. Based on our finding, COVIDNow exhibited sensitivity and specificity values of 87.5% and 80.6%, respectively. Taken together, RT-LAMP based detection of SARS-CoV-2 by utilizing COVIDNow might serves as a valuable diagnostic tool in the management of global COVID-19 pandemic condition. The Author(s). Published by Elsevier Ltd. 2023-02 2022-12-29 /pmc/articles/PMC9798669/ /pubmed/36594046 http://dx.doi.org/10.1016/j.jcvp.2022.100132 Text en © 2022 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Giantini, Astuti Suhaeri, Muhammad Kusumaningrum, Ardiana Prasetyo, Dimas Seto Sahar, Windy Hidayat, Rakhmad Putra, Muhammad Arza Hermawan Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title | Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title_full | Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title_fullStr | Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title_full_unstemmed | Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title_short | Evaluation of loop-mediated isothermal amplification for detecting COVID-19 |
title_sort | evaluation of loop-mediated isothermal amplification for detecting covid-19 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9798669/ https://www.ncbi.nlm.nih.gov/pubmed/36594046 http://dx.doi.org/10.1016/j.jcvp.2022.100132 |
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