Cargando…

Evaluation of loop-mediated isothermal amplification for detecting COVID-19

The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument...

Descripción completa

Detalles Bibliográficos
Autores principales: Giantini, Astuti, Suhaeri, Muhammad, Kusumaningrum, Ardiana, Prasetyo, Dimas Seto, Sahar, Windy, Hidayat, Rakhmad, Putra, Muhammad Arza, Hermawan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9798669/
https://www.ncbi.nlm.nih.gov/pubmed/36594046
http://dx.doi.org/10.1016/j.jcvp.2022.100132
_version_ 1784860952505614336
author Giantini, Astuti
Suhaeri, Muhammad
Kusumaningrum, Ardiana
Prasetyo, Dimas Seto
Sahar, Windy
Hidayat, Rakhmad
Putra, Muhammad Arza
Hermawan
author_facet Giantini, Astuti
Suhaeri, Muhammad
Kusumaningrum, Ardiana
Prasetyo, Dimas Seto
Sahar, Windy
Hidayat, Rakhmad
Putra, Muhammad Arza
Hermawan
author_sort Giantini, Astuti
collection PubMed
description The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument and trained personnel may hinder its application, especially in remote and facility-lacking areas. Reverse transcription loop-mediated isothermal amplification (RT-LAMP) may serve as a potential approach for detection of SARS-CoV-2 as the resources needed in its application is far less complex than those of qRT-PCR. Herein, we evaluated RT-LAMP based analytical method (COVIDNow), relative to qRT-PCR, in detecting SARS-CoV-2 by using 63 clinical respiratory samples. Based on our finding, COVIDNow exhibited sensitivity and specificity values of 87.5% and 80.6%, respectively. Taken together, RT-LAMP based detection of SARS-CoV-2 by utilizing COVIDNow might serves as a valuable diagnostic tool in the management of global COVID-19 pandemic condition.
format Online
Article
Text
id pubmed-9798669
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Author(s). Published by Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-97986692022-12-29 Evaluation of loop-mediated isothermal amplification for detecting COVID-19 Giantini, Astuti Suhaeri, Muhammad Kusumaningrum, Ardiana Prasetyo, Dimas Seto Sahar, Windy Hidayat, Rakhmad Putra, Muhammad Arza Hermawan J Clin Virol Plus Article The emergence of SARS-CoV-2 has caused worldwide pandemic of COVID-19. Infection is difficult to diagnose early as some patients remain asymptomatic and may carry this virus to other people. Currently, qRT-PCR is the widely accepted mode for detection. However, the need for sophisticated instrument and trained personnel may hinder its application, especially in remote and facility-lacking areas. Reverse transcription loop-mediated isothermal amplification (RT-LAMP) may serve as a potential approach for detection of SARS-CoV-2 as the resources needed in its application is far less complex than those of qRT-PCR. Herein, we evaluated RT-LAMP based analytical method (COVIDNow), relative to qRT-PCR, in detecting SARS-CoV-2 by using 63 clinical respiratory samples. Based on our finding, COVIDNow exhibited sensitivity and specificity values of 87.5% and 80.6%, respectively. Taken together, RT-LAMP based detection of SARS-CoV-2 by utilizing COVIDNow might serves as a valuable diagnostic tool in the management of global COVID-19 pandemic condition. The Author(s). Published by Elsevier Ltd. 2023-02 2022-12-29 /pmc/articles/PMC9798669/ /pubmed/36594046 http://dx.doi.org/10.1016/j.jcvp.2022.100132 Text en © 2022 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Giantini, Astuti
Suhaeri, Muhammad
Kusumaningrum, Ardiana
Prasetyo, Dimas Seto
Sahar, Windy
Hidayat, Rakhmad
Putra, Muhammad Arza
Hermawan
Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title_full Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title_fullStr Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title_full_unstemmed Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title_short Evaluation of loop-mediated isothermal amplification for detecting COVID-19
title_sort evaluation of loop-mediated isothermal amplification for detecting covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9798669/
https://www.ncbi.nlm.nih.gov/pubmed/36594046
http://dx.doi.org/10.1016/j.jcvp.2022.100132
work_keys_str_mv AT giantiniastuti evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT suhaerimuhammad evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT kusumaningrumardiana evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT prasetyodimasseto evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT saharwindy evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT hidayatrakhmad evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT putramuhammadarza evaluationofloopmediatedisothermalamplificationfordetectingcovid19
AT hermawan evaluationofloopmediatedisothermalamplificationfordetectingcovid19