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Recalibrating probabilistic forecasts of epidemics
Distributional forecasts are important for a wide variety of applications, including forecasting epidemics. Often, forecasts are miscalibrated, or unreliable in assigning uncertainty to future events. We present a recalibration method that can be applied to a black-box forecaster given retrospective...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9799311/ https://www.ncbi.nlm.nih.gov/pubmed/36520949 http://dx.doi.org/10.1371/journal.pcbi.1010771 |
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author | Rumack, Aaron Tibshirani, Ryan J. Rosenfeld, Roni |
author_facet | Rumack, Aaron Tibshirani, Ryan J. Rosenfeld, Roni |
author_sort | Rumack, Aaron |
collection | PubMed |
description | Distributional forecasts are important for a wide variety of applications, including forecasting epidemics. Often, forecasts are miscalibrated, or unreliable in assigning uncertainty to future events. We present a recalibration method that can be applied to a black-box forecaster given retrospective forecasts and observations, as well as an extension to make this method more effective in recalibrating epidemic forecasts. This method is guaranteed to improve calibration and log score performance when trained and measured in-sample. We also prove that the increase in expected log score of a recalibrated forecaster is equal to the entropy of the PIT distribution. We apply this recalibration method to the 27 influenza forecasters in the FluSight Network and show that recalibration reliably improves forecast accuracy and calibration. This method, available on Github, is effective, robust, and easy to use as a post-processing tool to improve epidemic forecasts. |
format | Online Article Text |
id | pubmed-9799311 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-97993112022-12-30 Recalibrating probabilistic forecasts of epidemics Rumack, Aaron Tibshirani, Ryan J. Rosenfeld, Roni PLoS Comput Biol Research Article Distributional forecasts are important for a wide variety of applications, including forecasting epidemics. Often, forecasts are miscalibrated, or unreliable in assigning uncertainty to future events. We present a recalibration method that can be applied to a black-box forecaster given retrospective forecasts and observations, as well as an extension to make this method more effective in recalibrating epidemic forecasts. This method is guaranteed to improve calibration and log score performance when trained and measured in-sample. We also prove that the increase in expected log score of a recalibrated forecaster is equal to the entropy of the PIT distribution. We apply this recalibration method to the 27 influenza forecasters in the FluSight Network and show that recalibration reliably improves forecast accuracy and calibration. This method, available on Github, is effective, robust, and easy to use as a post-processing tool to improve epidemic forecasts. Public Library of Science 2022-12-15 /pmc/articles/PMC9799311/ /pubmed/36520949 http://dx.doi.org/10.1371/journal.pcbi.1010771 Text en © 2022 Rumack et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Rumack, Aaron Tibshirani, Ryan J. Rosenfeld, Roni Recalibrating probabilistic forecasts of epidemics |
title | Recalibrating probabilistic forecasts of epidemics |
title_full | Recalibrating probabilistic forecasts of epidemics |
title_fullStr | Recalibrating probabilistic forecasts of epidemics |
title_full_unstemmed | Recalibrating probabilistic forecasts of epidemics |
title_short | Recalibrating probabilistic forecasts of epidemics |
title_sort | recalibrating probabilistic forecasts of epidemics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9799311/ https://www.ncbi.nlm.nih.gov/pubmed/36520949 http://dx.doi.org/10.1371/journal.pcbi.1010771 |
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