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Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community com...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9800606/ https://www.ncbi.nlm.nih.gov/pubmed/36590427 http://dx.doi.org/10.3389/fmicb.2022.1048522 |
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author | Pushkareva, Ekaterina Elster, Josef Holzinger, Andreas Niedzwiedz, Sarina Becker, Burkhard |
author_facet | Pushkareva, Ekaterina Elster, Josef Holzinger, Andreas Niedzwiedz, Sarina Becker, Burkhard |
author_sort | Pushkareva, Ekaterina |
collection | PubMed |
description | A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together. |
format | Online Article Text |
id | pubmed-9800606 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98006062022-12-31 Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? Pushkareva, Ekaterina Elster, Josef Holzinger, Andreas Niedzwiedz, Sarina Becker, Burkhard Front Microbiol Microbiology A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together. Frontiers Media S.A. 2022-12-16 /pmc/articles/PMC9800606/ /pubmed/36590427 http://dx.doi.org/10.3389/fmicb.2022.1048522 Text en Copyright © 2022 Pushkareva, Elster, Holzinger, Niedzwiedz and Becker. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Pushkareva, Ekaterina Elster, Josef Holzinger, Andreas Niedzwiedz, Sarina Becker, Burkhard Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title | Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_full | Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_fullStr | Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_full_unstemmed | Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_short | Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_sort | biocrusts from iceland and svalbard: does microbial community composition differ substantially? |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9800606/ https://www.ncbi.nlm.nih.gov/pubmed/36590427 http://dx.doi.org/10.3389/fmicb.2022.1048522 |
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