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Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims
Cuproptosis is a fresh form of the copper-elesclomol-triggered, mitochondrial tricarboxylic acid (TCA) dependent cell death. Yet, the subsumed mechanism of cuproptosis-associated lncRNAs in carcinoma is not wholly clarified. Here, We appraised 580 cuproptosis-associated lncRNAs in sarcoma and therea...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9800909/ https://www.ncbi.nlm.nih.gov/pubmed/36589745 http://dx.doi.org/10.3389/fcell.2022.989882 |
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author | Chu, Binxiang Zheng, Haihong Zheng, Xiaohe Feng, Xingbing Hong, Zhenghua |
author_facet | Chu, Binxiang Zheng, Haihong Zheng, Xiaohe Feng, Xingbing Hong, Zhenghua |
author_sort | Chu, Binxiang |
collection | PubMed |
description | Cuproptosis is a fresh form of the copper-elesclomol-triggered, mitochondrial tricarboxylic acid (TCA) dependent cell death. Yet, the subsumed mechanism of cuproptosis-associated lncRNAs in carcinoma is not wholly clarified. Here, We appraised 580 cuproptosis-associated lncRNAs in sarcoma and thereafter construed a module composing of 6 cuproptosis lncRNAs, entitled CuLncScore, utilizing a machine learning methodology. It could outstandingly discern the prognosis of patients in parallel with discriminating tumor immune microenvironment traits. Moreover, we simulate the classification system of cuproptosis lncRNAs by unsupervised learning method to facilitate differentiation of clinical denouement and immunotherapy modality options. Notably, Our Taizhou cohort validated the stability of CuLncScore and the classification system. Taking a step further, we checked these 6 cuproptosis lncRNAs by Quantitative real-time polymerase chain reaction (qRT-PCR) to ascertain their authenticity. All told, our investigations highlight that cuproptosis lncRNAs are involved in various components of sarcoma and assist in the formation of the tumor immune microenvironment. These results provide partial insights to further comprehend the molecular mechanisms of cuproptosis lncRNAs in sarcoma and could be helpful for the development of personalized therapeutic strategies targeting cuproptosis or cuproptosis lncRNAs. |
format | Online Article Text |
id | pubmed-9800909 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98009092022-12-31 Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims Chu, Binxiang Zheng, Haihong Zheng, Xiaohe Feng, Xingbing Hong, Zhenghua Front Cell Dev Biol Cell and Developmental Biology Cuproptosis is a fresh form of the copper-elesclomol-triggered, mitochondrial tricarboxylic acid (TCA) dependent cell death. Yet, the subsumed mechanism of cuproptosis-associated lncRNAs in carcinoma is not wholly clarified. Here, We appraised 580 cuproptosis-associated lncRNAs in sarcoma and thereafter construed a module composing of 6 cuproptosis lncRNAs, entitled CuLncScore, utilizing a machine learning methodology. It could outstandingly discern the prognosis of patients in parallel with discriminating tumor immune microenvironment traits. Moreover, we simulate the classification system of cuproptosis lncRNAs by unsupervised learning method to facilitate differentiation of clinical denouement and immunotherapy modality options. Notably, Our Taizhou cohort validated the stability of CuLncScore and the classification system. Taking a step further, we checked these 6 cuproptosis lncRNAs by Quantitative real-time polymerase chain reaction (qRT-PCR) to ascertain their authenticity. All told, our investigations highlight that cuproptosis lncRNAs are involved in various components of sarcoma and assist in the formation of the tumor immune microenvironment. These results provide partial insights to further comprehend the molecular mechanisms of cuproptosis lncRNAs in sarcoma and could be helpful for the development of personalized therapeutic strategies targeting cuproptosis or cuproptosis lncRNAs. Frontiers Media S.A. 2022-12-16 /pmc/articles/PMC9800909/ /pubmed/36589745 http://dx.doi.org/10.3389/fcell.2022.989882 Text en Copyright © 2022 Chu, Zheng, Zheng, Feng and Hong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Chu, Binxiang Zheng, Haihong Zheng, Xiaohe Feng, Xingbing Hong, Zhenghua Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title | Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title_full | Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title_fullStr | Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title_full_unstemmed | Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title_short | Cuproptosis-associated lncRNAs discern prognosis and immune microenvironment in sarcoma victims |
title_sort | cuproptosis-associated lncrnas discern prognosis and immune microenvironment in sarcoma victims |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9800909/ https://www.ncbi.nlm.nih.gov/pubmed/36589745 http://dx.doi.org/10.3389/fcell.2022.989882 |
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