Cargando…

Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion

This article presents the near-infrared spectroscopy (NIRS) dataset of cerebral (StO(2)c) and splanchnic (StO(2)s) oxygenation in 29 stable premature infants admitted to a tertiary neonatal intensive care unit who received elective packed red blood cell transfusion (PRBCT) to treat anemia of prematu...

Descripción completa

Detalles Bibliográficos
Autores principales: Balegar V, Kiran Kumar, Jayawardhana, Madhuka, de Chazal, Philip, Nanan, Ralph Kay Heinrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9803924/
https://www.ncbi.nlm.nih.gov/pubmed/36593770
http://dx.doi.org/10.1016/j.dib.2022.108824
_version_ 1784861992170815488
author Balegar V, Kiran Kumar
Jayawardhana, Madhuka
de Chazal, Philip
Nanan, Ralph Kay Heinrich
author_facet Balegar V, Kiran Kumar
Jayawardhana, Madhuka
de Chazal, Philip
Nanan, Ralph Kay Heinrich
author_sort Balegar V, Kiran Kumar
collection PubMed
description This article presents the near-infrared spectroscopy (NIRS) dataset of cerebral (StO(2)c) and splanchnic (StO(2)s) oxygenation in 29 stable premature infants admitted to a tertiary neonatal intensive care unit who received elective packed red blood cell transfusion (PRBCT) to treat anemia of prematurity. StO(2)c and StO(2)s data were prospectively recorded continuously from at least 4 hours before the beginning of PRBCT until 24 hours after its completion, using a 4-wavelength near-infrared spectroscopy (NIRS) monitor (FORE-SIGHT® absolute cerebral oximeter, CASMED, Branford, Connecticut, 06405 USA). StO(2) data were downloaded as an analog output at a sampling rate of 1000Hz and aligned along the time axis in LabChart reader format (.adicht files) using a PowerLab data acquisition system [1] (PowerLab®, ADInstruments, Sydney, Australia). The .adicht files were then converted into .mat file format using a Python script (Python(TM) version 3.7.3 [2]) and resampled at 1Hz for faster processing. Data that could not be physiologically explained (e.g., the absence of variability, [3] a 30% step change in StO(2) between two subsequent data points for StO(2)[4]), as well as the data during the period of ‘cares’ were presumed to be artefactual and were replaced with ‘NaN’ or ‘Not a Number’ which is recognised by Matlab [5] (MATLAB 9.3, The MathWorks, Inc., Massachusetts, United States) and ignored for all subsequent processing while maintaining the correct time point of the StO(2) signals. The data were then exported into Microsoft Excel format. The splanchnic cerebral oxygenation ratio (SCOR) was calculated as the ratio of StO(2)s/StO(2)c. A 4-hour mean pre-transfusion values (StO(2)s 0, StO(2)c 0, SCOR 0) and post-transfusion hourly mean values (1-28) were determined. Secondary data were derived from a Mixed Models for Repeated Measures (MMRM) analysis with the time point fitted as a fixed effect and the infant fitted as a random effect. The MMRM was used to perform paired comparisons between pre-transfusion and each of the post-baseline values. This article only provides the NIRS data. The secondary data and demography can be found in the article “Splanchnic-Cerebral Oxygenation Ratio associated with Packed Red Blood Cell Transfusion in preterm infants”, published in Transfusion Medicine. [6] The data will be of use to researchers in neonatology, transfusion medicine, and physiology to understand changes in cerebral and splanchnic oxygenation associated with PRBCT. Data collection, processing, and analysis can be remodelled in larger multicentric randomised controlled studies to evaluate the effect of transfusion and feeding on transfusion-associated necrotising enterocolitis. The data are also helpful to explore the autoregulatory behaviour of the brain and gut when the oxygen content of blood is increased by administering PRBCT.
format Online
Article
Text
id pubmed-9803924
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-98039242023-01-01 Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion Balegar V, Kiran Kumar Jayawardhana, Madhuka de Chazal, Philip Nanan, Ralph Kay Heinrich Data Brief Data Article This article presents the near-infrared spectroscopy (NIRS) dataset of cerebral (StO(2)c) and splanchnic (StO(2)s) oxygenation in 29 stable premature infants admitted to a tertiary neonatal intensive care unit who received elective packed red blood cell transfusion (PRBCT) to treat anemia of prematurity. StO(2)c and StO(2)s data were prospectively recorded continuously from at least 4 hours before the beginning of PRBCT until 24 hours after its completion, using a 4-wavelength near-infrared spectroscopy (NIRS) monitor (FORE-SIGHT® absolute cerebral oximeter, CASMED, Branford, Connecticut, 06405 USA). StO(2) data were downloaded as an analog output at a sampling rate of 1000Hz and aligned along the time axis in LabChart reader format (.adicht files) using a PowerLab data acquisition system [1] (PowerLab®, ADInstruments, Sydney, Australia). The .adicht files were then converted into .mat file format using a Python script (Python(TM) version 3.7.3 [2]) and resampled at 1Hz for faster processing. Data that could not be physiologically explained (e.g., the absence of variability, [3] a 30% step change in StO(2) between two subsequent data points for StO(2)[4]), as well as the data during the period of ‘cares’ were presumed to be artefactual and were replaced with ‘NaN’ or ‘Not a Number’ which is recognised by Matlab [5] (MATLAB 9.3, The MathWorks, Inc., Massachusetts, United States) and ignored for all subsequent processing while maintaining the correct time point of the StO(2) signals. The data were then exported into Microsoft Excel format. The splanchnic cerebral oxygenation ratio (SCOR) was calculated as the ratio of StO(2)s/StO(2)c. A 4-hour mean pre-transfusion values (StO(2)s 0, StO(2)c 0, SCOR 0) and post-transfusion hourly mean values (1-28) were determined. Secondary data were derived from a Mixed Models for Repeated Measures (MMRM) analysis with the time point fitted as a fixed effect and the infant fitted as a random effect. The MMRM was used to perform paired comparisons between pre-transfusion and each of the post-baseline values. This article only provides the NIRS data. The secondary data and demography can be found in the article “Splanchnic-Cerebral Oxygenation Ratio associated with Packed Red Blood Cell Transfusion in preterm infants”, published in Transfusion Medicine. [6] The data will be of use to researchers in neonatology, transfusion medicine, and physiology to understand changes in cerebral and splanchnic oxygenation associated with PRBCT. Data collection, processing, and analysis can be remodelled in larger multicentric randomised controlled studies to evaluate the effect of transfusion and feeding on transfusion-associated necrotising enterocolitis. The data are also helpful to explore the autoregulatory behaviour of the brain and gut when the oxygen content of blood is increased by administering PRBCT. Elsevier 2022-12-16 /pmc/articles/PMC9803924/ /pubmed/36593770 http://dx.doi.org/10.1016/j.dib.2022.108824 Text en Crown Copyright © 2022 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Balegar V, Kiran Kumar
Jayawardhana, Madhuka
de Chazal, Philip
Nanan, Ralph Kay Heinrich
Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title_full Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title_fullStr Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title_full_unstemmed Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title_short Cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
title_sort cerebral and splanchnic near-infrared spectroscopic dataset in premature newborns receiving packed red blood cell transfusion
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9803924/
https://www.ncbi.nlm.nih.gov/pubmed/36593770
http://dx.doi.org/10.1016/j.dib.2022.108824
work_keys_str_mv AT balegarvkirankumar cerebralandsplanchnicnearinfraredspectroscopicdatasetinprematurenewbornsreceivingpackedredbloodcelltransfusion
AT jayawardhanamadhuka cerebralandsplanchnicnearinfraredspectroscopicdatasetinprematurenewbornsreceivingpackedredbloodcelltransfusion
AT dechazalphilip cerebralandsplanchnicnearinfraredspectroscopicdatasetinprematurenewbornsreceivingpackedredbloodcelltransfusion
AT nananralphkayheinrich cerebralandsplanchnicnearinfraredspectroscopicdatasetinprematurenewbornsreceivingpackedredbloodcelltransfusion