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scFates: a scalable python package for advanced pseudotime and bifurcation analysis from single-cell data
SUMMARY: scFates provides an extensive toolset for the analysis of dynamic trajectories comprising tree learning, feature association testing, branch differential expression and with a focus on cell biasing and fate splits at the level of bifurcations. It is meant to be fully integrated into the sca...
Autores principales: | Faure, Louis, Soldatov, Ruslan, Kharchenko, Peter V, Adameyko, Igor |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9805561/ https://www.ncbi.nlm.nih.gov/pubmed/36394263 http://dx.doi.org/10.1093/bioinformatics/btac746 |
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